alignment

[ICLR 2026] DecAlign: Hierarchical Cross-Modal Alignment for Decoupled Multimodal Representation Learning

Reformatted Alignment

Easily align multi-line with support for different operators and custom configurations

Neural macine translation soft alignment visualisations for web and command line

FluentDNA allows you to browse sequence data of any size using a zooming visualization similar to Google Maps. You can use FluentDNA as a standalone program or as a python module for your own bioinformatics projects.

Interactive Visualization of Needleman-Wunsch Algorithm in Javascript

These are my tools, the 4ndr0tools.

Visualize the inner workings of RNA bioinformatics algorithms for structure prediction, interaction prediction and sequence alignment.

Indigo: SNV and InDel Discovery in Chromatogram traces obtained from Sanger sequencing of PCR products

BeHonest: Benchmarking Honesty in Large Language Models

Multiple sequence alignment visualizer

🔡 align-text with ANSI support for CLIs

DOM Text Based Multiple Sequence Alignment Library

An implementation for MLLM oversensitivity evaluation

Alignment, a collaborative, system aided, user driven ontology/vocabulary matching and validation platform.

Visualize C struct memory layouts, padding, and offsets – interactive web tool.

Regexp based alignment for Atom

The BioJS MSA viewer wrapped into an R package

The Manifold Alignment Protocol (MAP) is a geometric analysis framework for studying how complex systems—such as large language models, diffusion models, or physical measurement pipelines—converge, stabilize, and align under iterative processes.

Code for "Psychology of AI" Website