From fc69701af771e2e80fc5f26fc79cef9da9098c61 Mon Sep 17 00:00:00 2001 From: Alec Gunny Date: Mon, 19 Dec 2022 10:44:54 -0800 Subject: [PATCH 001/162] removing old deepclean and triton images and updating for ml4gw --- docker_images.txt | 8 +++----- 1 file changed, 3 insertions(+), 5 deletions(-) diff --git a/docker_images.txt b/docker_images.txt index 200f571..2347682 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -403,17 +403,15 @@ atanasi/darkmatter:latest lucarvirgo/tensorflowmatlab:latest containers.ligo.org/james-clark/tgr_images/testing_gr_fta:latest containers.ligo.org/james-clark/tgr_images/lalsuite-master:latest -containers.ligo.org/alec.gunny/deepclean-prod:export-20.07 -containers.ligo.org/alec.gunny/deepclean-prod:client-20.07 -containers.ligo.org/alec.gunny/deepclean-prod:server-20.07 -fastml/gwiaas.export:latest -fastml/gwiaas.tritonserver:latest containers.ligo.org/cwinpy/cwinpy-containers/cwinpy-dev-python38:latest containers.ligo.org/rhys.poulton/cw-frequencyhough-image:latest containers.ligo.org/rhys.poulton/cw-frequencyhough-image:escape-datalake containers.ligo.org/aei-tgr/cvmfs-images/pseob-rd:20220828 containers.ligo.org/aei-tgr/cvmfs-images/seob-rom:latest containers.ligo.org/alan.knee/lal-images/lalsuite-fstatbinary:latest +ghcr.io/ml4gw/hermes/tritonserver:22.07 +ghcr.io/ml4gw/hermes/tritonserver:22.02 +ghcr.io/ml4gw/pinto:main # LIGO/VIRGO/KAGRA containers containers.ligo.org/lscsoft/lalsuite/nightly:el7 From e2ca6df9e736982fae633f0e415df83b583b078d Mon Sep 17 00:00:00 2001 From: Matyas Selmeci Date: Thu, 22 Dec 2022 10:15:57 -0600 Subject: [PATCH 002/162] Fix missing import of `glob` --- cvmfs-singularity-sync | 1 + 1 file changed, 1 insertion(+) diff --git a/cvmfs-singularity-sync b/cvmfs-singularity-sync index 86dcffd..da8ea1f 100755 --- a/cvmfs-singularity-sync +++ b/cvmfs-singularity-sync @@ -42,6 +42,7 @@ import subprocess import dockerhub import cleanup import sqlitedict +import glob DOCKER_CREDS = dict() From 01a400557c127d5c7b1bf0032cd37718c831aa6b Mon Sep 17 00:00:00 2001 From: John Thiltges Date: Thu, 22 Dec 2022 11:22:00 -0600 Subject: [PATCH 003/162] Remove unavailable images from list $ docker pull ghcr.io/scipp-atlas/mario-mapyde/madgraph:latest Error response from daemon: Head "https://ghcr.io/v2/scipp-atlas/mario-mapyde/madgraph/manifests/latest": unauthorized $ docker pull ghcr.io/scipp-atlas/mario-mapyde/delphes:latest Error response from daemon: Head "https://ghcr.io/v2/scipp-atlas/mario-mapyde/delphes/manifests/latest": unauthorized --- docker_images.txt | 4 ---- 1 file changed, 4 deletions(-) diff --git a/docker_images.txt b/docker_images.txt index 6b24005..92dd0db 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -546,10 +546,6 @@ ericmjonas/osg:* jcha40/chexmix:latest jcha40/python_env:latest -# SCIPP, UCSC -ghcr.io/scipp-atlas/mario-mapyde/madgraph:latest -ghcr.io/scipp-atlas/mario-mapyde/delphes:latest - # University of Wisconsin - Jason Kwan Lab jasonkwan/autometa:latest From 49c4fad5462533b23ba63d2b00d7ff64b35acf76 Mon Sep 17 00:00:00 2001 From: Dmitri Smirnov Date: Fri, 23 Dec 2022 12:28:51 -0500 Subject: [PATCH 004/162] Add release tags for STAR collaboration --- docker_images.txt | 4 +++- 1 file changed, 3 insertions(+), 1 deletion(-) diff --git a/docker_images.txt b/docker_images.txt index dc9d309..978d800 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -557,8 +557,10 @@ comses/osg-netlogo:* # NCBI ncbi/pgap:2022-04-14.build6021 -# STAR experiment dev container +# STAR experiment images ghcr.io/star-bnl/star-sw +ghcr.io/star-bnl/star-sw:SL21d +ghcr.io/star-bnl/star-sw:SL21c # REDTOP Collaboration redtopexp/redtop:* From a9d0c673efea3da3c6b7da084ef7671fb2b4682e Mon Sep 17 00:00:00 2001 From: Alec Gunny Date: Tue, 3 Jan 2023 20:38:36 -0800 Subject: [PATCH 005/162] Update docker_images.txt --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index dc9d309..43f0ea0 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -410,6 +410,7 @@ containers.ligo.org/rhys.poulton/cw-frequencyhough-image:escape-datalake containers.ligo.org/aei-tgr/cvmfs-images/pseob-rd:20220828 containers.ligo.org/aei-tgr/cvmfs-images/seob-rom:latest containers.ligo.org/alan.knee/lal-images/lalsuite-fstatbinary:latest +ghcr.io/ml4gw/hermes/tritonserver:22.12 ghcr.io/ml4gw/hermes/tritonserver:22.07 ghcr.io/ml4gw/hermes/tritonserver:22.02 ghcr.io/ml4gw/pinto:main From 9faf95678ff56058d0a5a990c0ff2ca8770683b8 Mon Sep 17 00:00:00 2001 From: jsteinhoff Date: Tue, 10 Jan 2023 11:27:30 +0100 Subject: [PATCH 006/162] updated pSEOB TGR images --- docker_images.txt | 5 ++++- 1 file changed, 4 insertions(+), 1 deletion(-) diff --git a/docker_images.txt b/docker_images.txt index dc9d309..120a876 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -407,7 +407,10 @@ containers.ligo.org/james-clark/tgr_images/lalsuite-master:latest containers.ligo.org/cwinpy/cwinpy-containers/cwinpy-dev-python38:latest containers.ligo.org/rhys.poulton/cw-frequencyhough-image:latest containers.ligo.org/rhys.poulton/cw-frequencyhough-image:escape-datalake -containers.ligo.org/aei-tgr/cvmfs-images/pseob-rd:20220828 +containers.ligo.org/aei-tgr/cvmfs-images/pseob:rd-latest +containers.ligo.org/aei-tgr/cvmfs-images/pseob:fti-latest +containers.ligo.org/aei-tgr/cvmfs-images/pseob:testing +containers.ligo.org/aei-tgr/cvmfs-images/pseob:envs containers.ligo.org/aei-tgr/cvmfs-images/seob-rom:latest containers.ligo.org/alan.knee/lal-images/lalsuite-fstatbinary:latest ghcr.io/ml4gw/hermes/tritonserver:22.07 From c2bbda101e54a2605acd7cea6c3b2a7bd456f8a0 Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Fri, 13 Jan 2023 08:15:19 -0800 Subject: [PATCH 007/162] Added pytorch 1.12.1 --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index edcf43a..2ae1018 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -29,6 +29,7 @@ continuumio/anaconda gromacs/gromacs:* rocker/r-ver:latest lammps/lammps:stable_29Sep2021_centos7_openmpi_py3 +pytorch/pytorch:1.12.1-cuda11.3-cudnn8-devel pytorch/pytorch:1.13.0-cuda11.6-cudnn8-devel nvidia/opencl:runtime-ubuntu16.04 From 1a289e671f43425f2af48cfb4e7c8c96ee3a4d4d Mon Sep 17 00:00:00 2001 From: Dmitri Smirnov Date: Sun, 15 Jan 2023 15:14:49 -0500 Subject: [PATCH 008/162] Add release images for STAR@BNL years 2021, 2022, 2023 Base images for data & analyses preservation --- docker_images.txt | 9 ++++++++- 1 file changed, 8 insertions(+), 1 deletion(-) diff --git a/docker_images.txt b/docker_images.txt index 2ae1018..179a114 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -558,10 +558,17 @@ comses/osg-netlogo:* # NCBI ncbi/pgap:2022-04-14.build6021 -# STAR experiment images +# STAR experiment at Brookhaven National Lab images ghcr.io/star-bnl/star-sw +ghcr.io/star-bnl/star-sw:SL23a +ghcr.io/star-bnl/star-sw:SL22c +ghcr.io/star-bnl/star-sw:SL22b +ghcr.io/star-bnl/star-sw:SL22a ghcr.io/star-bnl/star-sw:SL21d ghcr.io/star-bnl/star-sw:SL21c +ghcr.io/star-bnl/star-sw:SL21b +ghcr.io/star-bnl/star-sw:SL21a +ghcr.io/star-bnl/star-sw:SL20c # REDTOP Collaboration redtopexp/redtop:* From 787db89b4a8d51494856fe0aeeab6db42705aeb1 Mon Sep 17 00:00:00 2001 From: Dmitri Smirnov Date: Sun, 15 Jan 2023 22:52:23 -0500 Subject: [PATCH 009/162] Add release images for STAR@BNL year 2019 --- docker_images.txt | 2 ++ 1 file changed, 2 insertions(+) diff --git a/docker_images.txt b/docker_images.txt index 179a114..7d95db2 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -569,6 +569,8 @@ ghcr.io/star-bnl/star-sw:SL21c ghcr.io/star-bnl/star-sw:SL21b ghcr.io/star-bnl/star-sw:SL21a ghcr.io/star-bnl/star-sw:SL20c +ghcr.io/star-bnl/star-sw:SL19e +ghcr.io/star-bnl/star-sw:SL19b # REDTOP Collaboration redtopexp/redtop:* From de5c05d7691a545168f7a1ed547f7cca4fbf33fc Mon Sep 17 00:00:00 2001 From: marc1uk Date: Tue, 24 Jan 2023 20:20:28 +0000 Subject: [PATCH 010/162] add anniesoft g4dirt image --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 7d95db2..62d5c60 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -107,6 +107,7 @@ amogan/larcv2:ub20.04-cuda11.0-pytorch1.7.1-larndsim-cvmfs anniesoft/toolanalysis anniesoft/wcsim anniesoft/genie3 +anniesoft/g4dirt arburks/aris-convert:latest areias/viral-mutation:latest arnaudbecheler/quetzal-nest:* From 8b42e684dcf693471a51546fd72a5003cdebb66d Mon Sep 17 00:00:00 2001 From: Peter <5311312+hopeness@users.noreply.github.com> Date: Wed, 1 Mar 2023 14:21:38 -0500 Subject: [PATCH 011/162] Add images for FIU_Hamid FPHLM Project Based on opensciencegrid/osgvo-ubuntu-20.04 add some environment to setup the project --- docker_images.txt | 3 +++ 1 file changed, 3 insertions(+) diff --git a/docker_images.txt b/docker_images.txt index 62d5c60..2ced466 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -575,3 +575,6 @@ ghcr.io/star-bnl/star-sw:SL19b # REDTOP Collaboration redtopexp/redtop:* + +# FIU_Hamid FPHLM +houpengg/fphlm:* From 334d6eb1eb195041d49bf71024a00a3cee0022b4 Mon Sep 17 00:00:00 2001 From: Pengfei Ding Date: Tue, 14 Mar 2023 15:39:07 -0500 Subject: [PATCH 012/162] switch to use ghcr.io hosted NOvA images --- docker_images.txt | 22 ++++++++++++++++++---- 1 file changed, 18 insertions(+), 4 deletions(-) diff --git a/docker_images.txt b/docker_images.txt index 2ced466..ba91e04 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -371,10 +371,24 @@ fermilab/fnal-wn-sl6:* fermilab/benchmark:* # NOvA Experiment -novaexperiment/el7-tensorflow-gpu:* -novaexperiment/nova-sl7-novat2k:* -novaexperiment/slf67:* -novaexperiment/sl7:* +ghcr.io/novaexperiment/el7-tensorflow-gpu:latest +ghcr.io/novaexperiment/nova-sl7-novat2k:2020-10-27_freeze +ghcr.io/novaexperiment/nova-sl7-novat2k:aborttest +ghcr.io/novaexperiment/nova-sl7-novat2k:latest +ghcr.io/novaexperiment/nova-sl7-novat2k:nightmare +ghcr.io/novaexperiment/nova-sl7-novat2k:novatest +ghcr.io/novaexperiment/nova-sl7-novat2k:poissondata +ghcr.io/novaexperiment/nova-sl7-novat2k:v1_nonorms +ghcr.io/novaexperiment/nova-sl7-novat2k:v2_withnorms +ghcr.io/novaexperiment/nova-sl7-novat2k:v3_realnddata_cosmics +ghcr.io/novaexperiment/nova-sl7-novat2k:v4_fixcosmicsrock +ghcr.io/novaexperiment/nova-sl7-novat2k:v5_setasimov +ghcr.io/novaexperiment/sl7:latest +ghcr.io/novaexperiment/sl7:master +ghcr.io/novaexperiment/sl7:mini +ghcr.io/novaexperiment/sl7:mpichdiy +ghcr.io/novaexperiment/sl7:v1.1.0 +ghcr.io/novaexperiment/slf67:latest egoodman/t2knova_mach3_configdata:PostBANFF egoodman/mach3_binned_osc:PostBanff From 9f0487f4c9a11986fc5563dfcc467b6e263de54e Mon Sep 17 00:00:00 2001 From: Linghai wang <22423982+nxdens@users.noreply.github.com> Date: Mon, 20 Mar 2023 15:13:50 -0400 Subject: [PATCH 013/162] Updated with latest version of fmriprep Added fmriprep 23.0.0 --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index ba91e04..cc6b61b 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -325,6 +325,7 @@ wipac/skylab:1.0.0 #fMRI Prep poldracklab/fmriprep nipreps/fmriprep:20.2.1 +nipreps/fmriprep:23.0.0 # cyverse container camp evolinc/rmta:1.6 From c622841dc3f854e57f0e041c3d48b60bebd819ba Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Nicol=C3=A1s=20Esquivel?= <12850299+nesquivelr@users.noreply.github.com> Date: Tue, 21 Mar 2023 15:55:40 -0300 Subject: [PATCH 014/162] Add an image to test some lsst pipeline processes --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index cc6b61b..2275c7f 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -210,6 +210,7 @@ lifebitai/impute2:latest biocontainers/vcftools:v0.1.16-1-deb_cv1 rhughwhite/minimac3:2.0.1 biocontainers/minimac4:v1.0.0-2-deb_cv1 +nnesquivelr/decam_proc_base:* # E4S ecpe4s/e4s-cuda:22.11 From efe23a5213453b6d953e339e66a8766a8623a57e Mon Sep 17 00:00:00 2001 From: Dmitri Smirnov Date: Fri, 24 Mar 2023 18:10:47 -0400 Subject: [PATCH 015/162] Add new release image SL23b STAR@BNL --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 2275c7f..ae8e62e 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -577,6 +577,7 @@ ncbi/pgap:2022-04-14.build6021 # STAR experiment at Brookhaven National Lab images ghcr.io/star-bnl/star-sw +ghcr.io/star-bnl/star-sw:SL23b ghcr.io/star-bnl/star-sw:SL23a ghcr.io/star-bnl/star-sw:SL22c ghcr.io/star-bnl/star-sw:SL22b From 69948ffea98b25d7f4010a84439cb0ac1afac84d Mon Sep 17 00:00:00 2001 From: Linghai wang <22423982+nxdens@users.noreply.github.com> Date: Wed, 29 Mar 2023 15:23:44 -0400 Subject: [PATCH 016/162] added custom image for fmriprep --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index ae8e62e..1d57162 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -327,6 +327,7 @@ wipac/skylab:1.0.0 poldracklab/fmriprep nipreps/fmriprep:20.2.1 nipreps/fmriprep:23.0.0 +nxdens/fmriprep-afni:1.0 # cyverse container camp evolinc/rmta:1.6 From ada86f0ebae3ca3de0b8dc9ff63778f0761b476c Mon Sep 17 00:00:00 2001 From: John Thiltges Date: Fri, 31 Mar 2023 16:57:50 -0500 Subject: [PATCH 017/162] Set more MIME types when requesting manifest Registries will return 404 if the requested types don't match what's available --- dockerhub.py | 14 +++++++++++--- 1 file changed, 11 insertions(+), 3 deletions(-) diff --git a/dockerhub.py b/dockerhub.py index 3b30298..306a212 100644 --- a/dockerhub.py +++ b/dockerhub.py @@ -513,20 +513,28 @@ def manifest(self, user, repository, tag, head=False, **kwargs): """ url = self._api_url('{0}/{1}/manifests/{2}'.format(user, repository, tag)) + + manifest_mime = ', '.join(( + 'application/vnd.docker.distribution.manifest.v1+json', + 'application/vnd.docker.distribution.manifest.v2+json', + 'application/vnd.docker.distribution.manifest.list.v2+json', + 'application/vnd.oci.image.manifest.v1+json', + 'application/vnd.oci.image.index.v1+json', + )) #Added support to retrieve oci images for hub.opensciencegrid.org #https://gitlab.com/gitlab-org/gitlab-foss/-/merge_requests/31127 headers_has_accept = False if 'headers' not in kwargs: - kwargs['headers'] = {'ACCEPT' : 'application/vnd.oci.image.manifest.v1+json'} + kwargs['headers'] = {'ACCEPT': manifest_mime} else: for headers_key in kwargs['headers'].keys(): if 'accept' in headers_key.casefold(): headers_has_accept = True - kwargs['headers'][headers_key]+=', application/vnd.oci.image.manifest.v1+json' + kwargs['headers'][headers_key]+=', ' + manifest_mime break if not headers_has_accept: - kwargs['headers']['ACCEPT'] = 'application/vnd.oci.image.manifest.v1+json' + kwargs['headers']['ACCEPT'] = manifest_mime if head: return self._do_requests_head(url, **kwargs) From 460fcf6cd96ceee6ac25140138c6eb3675ac3e64 Mon Sep 17 00:00:00 2001 From: Ian Harry Date: Thu, 6 Apr 2023 09:42:58 +0100 Subject: [PATCH 018/162] Update PyCBC CVMFS envs to 2.2.* PyCBC has now released version 2.2.0. As LIGO/Virgo/KAGRA prepares for O4 we would like to keep the latest release branch on CVMFS for production runs. We may yet bump this to 2.3.* before O4 runs begin. --- docker_images.txt | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docker_images.txt b/docker_images.txt index 1d57162..ba9beb5 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -274,7 +274,7 @@ igwn/software:stretch-proposed # LIGO PyCBC compute nodes pycbc/pycbc-el7:v1.16.12 pycbc/pycbc-el7:v1.18.3 -pycbc/pycbc-el8:v2.0.* +pycbc/pycbc-el8:v2.2.* pycbc/pycbc-el8:latest # CMS worker node From 9014cdf3ff97aeafeae7ef2bda23a4c3327ff3d1 Mon Sep 17 00:00:00 2001 From: Jing Liu Date: Thu, 6 Apr 2023 08:26:24 -0500 Subject: [PATCH 019/162] added Geant4 simulation and analysis images --- docker_images.txt | 6 ++++++ 1 file changed, 6 insertions(+) diff --git a/docker_images.txt b/docker_images.txt index 1d57162..3342c6a 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -212,6 +212,12 @@ rhughwhite/minimac3:2.0.1 biocontainers/minimac4:v1.0.0-2-deb_cv1 nnesquivelr/decam_proc_base:* +# Geant4 simulation and analysis tools +physino/gears +physino/mingle +physino/heprapp +physino/root:* + # E4S ecpe4s/e4s-cuda:22.11 ecpe4s/e4s-rocm:22.11 From 70f631275429283e5b368e8769812d0e2475d368 Mon Sep 17 00:00:00 2001 From: Patrick Godwin Date: Thu, 20 Apr 2023 15:59:41 -0700 Subject: [PATCH 020/162] add SNAX toolkit images --- docker_images.txt | 2 ++ 1 file changed, 2 insertions(+) diff --git a/docker_images.txt b/docker_images.txt index 65b446f..26da9b1 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -459,6 +459,8 @@ containers.ligo.org/computing/rucio/containers/rucio-clients:latest containers.ligo.org/lscsoft/gstlal:master containers.ligo.org/lscsoft/gstlal:o4-offline-dev containers.ligo.org/lscsoft/gstlal:o4-online-dev +containers.ligo.org/snax/snax:v0.5.1 +containers.ligo.org/snax/snax:v0.5.2 containers.ligo.org/lmxbcrosscorr/containers:crosscorr-lattice-dev-clean containers.ligo.org/echoes-model-independent/bayeswave-echoes-image:v1.0.7_echoes_reviewed From f588ab347de1e876292bbca67312327b4ace7d98 Mon Sep 17 00:00:00 2001 From: John Thiltges Date: Wed, 19 Apr 2023 12:45:43 -0500 Subject: [PATCH 021/162] Modify logic to generate .images output directory If manifest does not have layers, use the Docker-Content-Digest --- cvmfs-singularity-sync | 21 +++++++++++++-------- 1 file changed, 13 insertions(+), 8 deletions(-) diff --git a/cvmfs-singularity-sync b/cvmfs-singularity-sync index da8ea1f..acc6db9 100755 --- a/cvmfs-singularity-sync +++ b/cvmfs-singularity-sync @@ -361,11 +361,11 @@ def get_manifest(hub, namespace, repo_name, repo_tag, manifest_cache): digest = metadata.headers['docker-content-digest'] if digest in manifest_cache: - return manifest_cache[digest] + return manifest_cache[digest], digest else: manifest = hub.manifest(namespace, repo_name, repo_tag) manifest_cache[digest] = manifest - return manifest + return manifest, digest def publish_image(image, singularity_rootfs, registry, doauth, manifest_cache): @@ -384,28 +384,33 @@ def publish_image(image, singularity_rootfs, registry, doauth, manifest_cache): registry = "https://%s" % registry auth = DOCKER_CREDS.get(registry, {}) hub = dockerhub.DockerHub(url=registry, namespace=namespace, repo=repo_name, **auth) - manifest = get_manifest(hub, namespace, repo_name, repo_tag, manifest_cache) + manifest, digest = get_manifest(hub, namespace, repo_name, repo_tag, manifest_cache) # Calculate a unique hash across all layers. We'll use that as the identifier # for the final image. - if manifest['schemaVersion'] == 1: + if manifest['schemaVersion'] == 1 and 'fsLayers' in manifest: hasher = hashlib.sha256() for layerinfo in manifest['fsLayers']: layer_hash = layerinfo['blobSum'].split(":")[-1].encode('utf-8') hasher.update(layer_hash) image_hash = hasher.hexdigest() - elif manifest['schemaVersion'] == 2: + elif manifest['schemaVersion'] == 2 and 'layers' in manifest: hasher = hashlib.sha256() for layerinfo in manifest['layers']: layer_hash = layerinfo['digest'].split(":")[-1].encode('utf-8') hasher.update(layer_hash) image_hash = hasher.hexdigest() else: - raise ValueError('Cannot handle schemaVersion: %s' % manifest['schemaVersion']) + # Use the Docker-Content-Digest to identify the image + image_hash = digest # The image is staged to $ROOTFS/.images/$HASH - image_parentdir = os.path.join(singularity_rootfs, ".images", image_hash[0:2]) - image_dir = os.path.join(image_parentdir, image_hash[2:]) + # Docker-Content-Digest uses format 'sha256:dead...beef' + # Split it after the hash type ^^^^^^^^^ + # plus two chars ^^^^^^^^^ + sep = image_hash.find(':') + image_parentdir = os.path.join(singularity_rootfs, ".images", image_hash[0:sep+3]) + image_dir = os.path.join(image_parentdir, image_hash[sep+3:]) # If the image has already been staged, simply return. if os.path.exists(image_dir): From 4e05777f05560ff09d67caefc6ea030deb4788d2 Mon Sep 17 00:00:00 2001 From: ylecoeuche Date: Wed, 26 Apr 2023 16:19:38 -0700 Subject: [PATCH 022/162] Update docker_images.txt --- docker_images.txt | 3 +++ 1 file changed, 3 insertions(+) diff --git a/docker_images.txt b/docker_images.txt index 26da9b1..cdaaae7 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -604,3 +604,6 @@ redtopexp/redtop:* # FIU_Hamid FPHLM houpengg/fphlm:* + +# Yannick Lecoeuche +yannick.lecoeuche/glitch-pe-container/glitch-pe From 27acd3be1d23a45eedd6b25ccfc9e9c26aab1ca8 Mon Sep 17 00:00:00 2001 From: ylecoeuche Date: Fri, 28 Apr 2023 11:05:18 -0700 Subject: [PATCH 023/162] Update docker_images.txt --- docker_images.txt | 4 +--- 1 file changed, 1 insertion(+), 3 deletions(-) diff --git a/docker_images.txt b/docker_images.txt index cdaaae7..f507539 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -442,6 +442,7 @@ ghcr.io/ml4gw/hermes/tritonserver:22.12 ghcr.io/ml4gw/hermes/tritonserver:22.07 ghcr.io/ml4gw/hermes/tritonserver:22.02 ghcr.io/ml4gw/pinto:main +containers.ligo.org/yannick.lecoeuche/glitch-pe-container/glitch-pe:latest # LIGO/VIRGO/KAGRA containers containers.ligo.org/lscsoft/lalsuite/nightly:el7 @@ -604,6 +605,3 @@ redtopexp/redtop:* # FIU_Hamid FPHLM houpengg/fphlm:* - -# Yannick Lecoeuche -yannick.lecoeuche/glitch-pe-container/glitch-pe From e02a32cf0e6213bd30446014c9bee39c03c96c73 Mon Sep 17 00:00:00 2001 From: Rachel Lombardi <37351287+rachellombardi@users.noreply.github.com> Date: Wed, 3 May 2023 10:03:21 -0500 Subject: [PATCH 024/162] Adding teamcompas/compas Per FD ticket: 72881 --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index f507539..25daebb 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -188,6 +188,7 @@ sswiston/revbayes:* syavuz/tidyrstan:latest syavuz/modelcomparison:v1 sylabsio/lolcow:latest +teamcompas/compas vedularaghu/unet_wf:latest weiminghu123/panen:default weiphy/skopt From 4620d6157fc71b36097378240174b7b6027333c2 Mon Sep 17 00:00:00 2001 From: Rachel Lombardi <37351287+rachellombardi@users.noreply.github.com> Date: Wed, 3 May 2023 10:04:19 -0500 Subject: [PATCH 025/162] Revert "Adding teamcompas/compas" --- docker_images.txt | 1 - 1 file changed, 1 deletion(-) diff --git a/docker_images.txt b/docker_images.txt index 25daebb..f507539 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -188,7 +188,6 @@ sswiston/revbayes:* syavuz/tidyrstan:latest syavuz/modelcomparison:v1 sylabsio/lolcow:latest -teamcompas/compas vedularaghu/unet_wf:latest weiminghu123/panen:default weiphy/skopt From 25ed25237597712290115b1f9b54f7b4a63a9ed4 Mon Sep 17 00:00:00 2001 From: Rachel Lombardi <37351287+rachellombardi@users.noreply.github.com> Date: Wed, 3 May 2023 10:07:09 -0500 Subject: [PATCH 026/162] Add teamcompas/compas:* Per FD ticket: 72881 --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index f507539..d30c69c 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -188,6 +188,7 @@ sswiston/revbayes:* syavuz/tidyrstan:latest syavuz/modelcomparison:v1 sylabsio/lolcow:latest +teamcompas/compas:* vedularaghu/unet_wf:latest weiminghu123/panen:default weiphy/skopt From a5aed93d1777a1135a4a95cd401f4ebaee7375c9 Mon Sep 17 00:00:00 2001 From: Zoya Vallari Date: Mon, 15 May 2023 08:12:16 -0700 Subject: [PATCH 027/162] adding new nova-t2k containers --- docker_images.txt | 2 ++ 1 file changed, 2 insertions(+) diff --git a/docker_images.txt b/docker_images.txt index ba91e04..7f6be96 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -383,6 +383,8 @@ ghcr.io/novaexperiment/nova-sl7-novat2k:v2_withnorms ghcr.io/novaexperiment/nova-sl7-novat2k:v3_realnddata_cosmics ghcr.io/novaexperiment/nova-sl7-novat2k:v4_fixcosmicsrock ghcr.io/novaexperiment/nova-sl7-novat2k:v5_setasimov +ghcr.io/novaexperiment/nova-sl7-novat2k:v6c_nightmareplus +ghcr.io/novaexperiment/nova-sl7-novat2k:v7_pvalue ghcr.io/novaexperiment/sl7:latest ghcr.io/novaexperiment/sl7:master ghcr.io/novaexperiment/sl7:mini From 6d0d7a9b90646331fb95da1f499343dcb735ef7b Mon Sep 17 00:00:00 2001 From: Zoya Vallari Date: Tue, 16 May 2023 12:20:23 -0700 Subject: [PATCH 028/162] new T2K container with p value capabilities --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 7f6be96..a555394 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -393,6 +393,7 @@ ghcr.io/novaexperiment/sl7:v1.1.0 ghcr.io/novaexperiment/slf67:latest egoodman/t2knova_mach3_configdata:PostBANFF egoodman/mach3_binned_osc:PostBanff +egoodman/mach3_pvalue:latest #holosim (tree migration) astrand/holosim From 6d619542aaef9cc789d358bb8f44ac1361044c2d Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Thu, 18 May 2023 11:21:07 -0700 Subject: [PATCH 029/162] Added el9, removed old ligo nightlies --- docker_images.txt | 3 +-- 1 file changed, 1 insertion(+), 2 deletions(-) diff --git a/docker_images.txt b/docker_images.txt index 209addc..92c29ba 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -56,6 +56,7 @@ opensciencegrid/osgvo-el6-feltus opensciencegrid/osgvo-el7 opensciencegrid/osgvo-el7-cuda10:* opensciencegrid/osgvo-el8 +opensciencegrid/osgvo-el9 opensciencegrid/osgvo-freesurfer:* opensciencegrid/osgvo-gromacs:* opensciencegrid/osgvo-gromacs-gpu @@ -449,8 +450,6 @@ ghcr.io/ml4gw/pinto:main containers.ligo.org/yannick.lecoeuche/glitch-pe-container/glitch-pe:latest # LIGO/VIRGO/KAGRA containers -containers.ligo.org/lscsoft/lalsuite/nightly:el7 -containers.ligo.org/lscsoft/lalsuite/nightly:buster containers.ligo.org/lscsoft/lalsuite/lalsuite-v6.59:el7 containers.ligo.org/lscsoft/lalsuite/lalsuite-v6.59:stretch containers.ligo.org/lscsoft/lalsuite/lalsuite-v6.60:el7 From 45d5149c8b735f4e229dcd20cf9ef5b4bb5a8f33 Mon Sep 17 00:00:00 2001 From: cortp <104941927+cortp@users.noreply.github.com> Date: Mon, 5 Jun 2023 16:41:22 -0400 Subject: [PATCH 030/162] update gstlal docker images --- docker_images.txt | 3 +-- 1 file changed, 1 insertion(+), 2 deletions(-) diff --git a/docker_images.txt b/docker_images.txt index 92c29ba..371a26f 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -461,8 +461,7 @@ containers.ligo.org/lscsoft/bayeswave:v1.0.6 containers.ligo.org/lscsoft/bayeswave:v1.0.7 containers.ligo.org/computing/rucio/containers/rucio-clients:latest containers.ligo.org/lscsoft/gstlal:master -containers.ligo.org/lscsoft/gstlal:o4-offline-dev -containers.ligo.org/lscsoft/gstlal:o4-online-dev +containers.ligo.org/lscsoft/gstlal:osg-dev containers.ligo.org/snax/snax:v0.5.1 containers.ligo.org/snax/snax:v0.5.2 containers.ligo.org/lmxbcrosscorr/containers:crosscorr-lattice-dev-clean From 2fa36c980c493be71e54514fd529ba517758c8bb Mon Sep 17 00:00:00 2001 From: Dmitri Smirnov Date: Wed, 14 Jun 2023 20:25:04 -0400 Subject: [PATCH 031/162] add more release tags for STAR software --- docker_images.txt | 2 ++ 1 file changed, 2 insertions(+) diff --git a/docker_images.txt b/docker_images.txt index 371a26f..50318d2 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -589,6 +589,8 @@ ncbi/pgap:2022-04-14.build6021 # STAR experiment at Brookhaven National Lab images ghcr.io/star-bnl/star-sw +ghcr.io/star-bnl/star-sw:SL23d +ghcr.io/star-bnl/star-sw:SL23c ghcr.io/star-bnl/star-sw:SL23b ghcr.io/star-bnl/star-sw:SL23a ghcr.io/star-bnl/star-sw:SL22c From 852dc7a164d7eb85719dc74030ce33b5814d06bd Mon Sep 17 00:00:00 2001 From: NJM-QSensing <101287715+NJM-QSensing@users.noreply.github.com> Date: Fri, 23 Jun 2023 14:10:33 -0700 Subject: [PATCH 032/162] Update docker_images.txt Added line "nathanjmcl/gpaw-vdw-repository:latest" referring to user defined image to docker_images.txt --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 50318d2..8bc0ae0 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -162,6 +162,7 @@ leofang/cthyb-ohmic m8zeng/julia-packages mfrayer/perl-stats molssi/qcarchive_worker_openff:* +nathanjmcl/gpaw-vdw-repository:latest nipy/mindboggle nkern/21cmfast_env npanicker/r-desolve:* From ed188da1772deac0d88ff2549312076a4e22d22b Mon Sep 17 00:00:00 2001 From: Sameer Shende Date: Sun, 25 Jun 2023 04:44:22 -0700 Subject: [PATCH 033/162] Added Docker images from the E4S 23.05 release [https://e4s.io/talks/E4S_23.05.pdf]. --- docker_images.txt | 3 +++ 1 file changed, 3 insertions(+) diff --git a/docker_images.txt b/docker_images.txt index 8bc0ae0..35ddad1 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -225,6 +225,9 @@ physino/root:* ecpe4s/e4s-cuda:22.11 ecpe4s/e4s-rocm:22.11 ecpe4s/e4s-oneapi:22.11 +ecpe4s/e4s-cuda:23.05 +ecpe4s/e4s-rocm:23.05 +ecpe4s/e4s-oneapi:23.05 # MINT project (rynge) ankushumn/rsatest From d84df994c0abd03f7b6670e4018f263037b244c1 Mon Sep 17 00:00:00 2001 From: Matyas Selmeci Date: Sun, 2 Jul 2023 19:16:29 -0500 Subject: [PATCH 034/162] Add hub.opensciencegrid.org/matyasosg/testimage:latest, Matyas's small image for testing a site --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 35ddad1..7fc460e 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -160,6 +160,7 @@ k3jph/torch-diffeq:latest k3jph/python-optimization:latest leofang/cthyb-ohmic m8zeng/julia-packages +hub.opensciencegrid.org/matyasosg/testimage:latest mfrayer/perl-stats molssi/qcarchive_worker_openff:* nathanjmcl/gpaw-vdw-repository:latest From f512ca1263489e85423eca8634265fd7964127c6 Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Mon, 3 Jul 2023 10:40:36 -0700 Subject: [PATCH 035/162] Removed non-existent images drtmfigy/herwig_hjets drtmfigy/fbps --- docker_images.txt | 2 -- 1 file changed, 2 deletions(-) diff --git a/docker_images.txt b/docker_images.txt index 7fc460e..20c4123 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -134,8 +134,6 @@ cnatzke/grsisort:* dmbala/r-3.4.1 dmbala/r-ebcrimage drtmfigy/hjets_herwig7 -drtmfigy/herwig_hjets -drtmfigy/fbps econtal/numpy-mkl:latest efajardo/osgvo-nsides:latest efajardo/astroflow:latest From 3518549fed3a046f39defaa49954722e568ed97d Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Tue, 11 Jul 2023 15:50:43 -0700 Subject: [PATCH 036/162] Added a set of htc/* images to replace osgvo ones --- docker_images.txt | 6 ++++++ 1 file changed, 6 insertions(+) diff --git a/docker_images.txt b/docker_images.txt index 20c4123..de4accd 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -43,6 +43,12 @@ opensciencegrid/osg-wn:3.3-el6 opensciencegrid/osg-wn:3.3-testing-el7 opensciencegrid/osg-wn:3.3-devel-el7 +# htc/ - this are the images replacing the osgvo-* ones +hub.opensciencegrid.org/htc/debian:* +hub.opensciencegrid.org/htc/matlab-runtime:* +hub.opensciencegrid.org/htc/rocky:* +hub.opensciencegrid.org/htc/ubuntu:* + # OSGVO opensciencegrid/npjoodi opensciencegrid/osgvo-ants From e5f550a6722fb1da4bfee2541e74bcc383d4a1eb Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Thu, 13 Jul 2023 09:27:42 -0700 Subject: [PATCH 037/162] Explicit tags on harbor for now --- docker_images.txt | 11 +++++++---- 1 file changed, 7 insertions(+), 4 deletions(-) diff --git a/docker_images.txt b/docker_images.txt index de4accd..718ab5a 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -44,10 +44,13 @@ opensciencegrid/osg-wn:3.3-testing-el7 opensciencegrid/osg-wn:3.3-devel-el7 # htc/ - this are the images replacing the osgvo-* ones -hub.opensciencegrid.org/htc/debian:* -hub.opensciencegrid.org/htc/matlab-runtime:* -hub.opensciencegrid.org/htc/rocky:* -hub.opensciencegrid.org/htc/ubuntu:* +hub.opensciencegrid.org/htc/debian:12 +hub.opensciencegrid.org/htc/matlab-runtime:R2023a +hub.opensciencegrid.org/htc/rocky:8 +hub.opensciencegrid.org/htc/rocky:9 +hub.opensciencegrid.org/htc/rocky:8-cuda-11.0.3 +hub.opensciencegrid.org/htc/ubuntu:20.04 +hub.opensciencegrid.org/htc/ubuntu:22.04 # OSGVO opensciencegrid/npjoodi From ab53df1bcd3bc4353cc5be91b7cb6dba8d2d1c53 Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Tue, 18 Jul 2023 09:22:37 -0700 Subject: [PATCH 038/162] Added htc/centos:7 --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 718ab5a..5677d0f 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -44,6 +44,7 @@ opensciencegrid/osg-wn:3.3-testing-el7 opensciencegrid/osg-wn:3.3-devel-el7 # htc/ - this are the images replacing the osgvo-* ones +hub.opensciencegrid.org/htc/centos:7 hub.opensciencegrid.org/htc/debian:12 hub.opensciencegrid.org/htc/matlab-runtime:R2023a hub.opensciencegrid.org/htc/rocky:8 From 00acc7f6e89f851006ff8cf9b767f9b89e110b38 Mon Sep 17 00:00:00 2001 From: thesullivantage <38443606+thesullivantage@users.noreply.github.com> Date: Wed, 26 Jul 2023 02:00:36 -0400 Subject: [PATCH 039/162] add image --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 5677d0f..994f1e0 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -461,6 +461,7 @@ ghcr.io/ml4gw/hermes/tritonserver:22.07 ghcr.io/ml4gw/hermes/tritonserver:22.02 ghcr.io/ml4gw/pinto:main containers.ligo.org/yannick.lecoeuche/glitch-pe-container/glitch-pe:latest +containers.ligo.org/bayeswave/igwn-wave-compare:latest # LIGO/VIRGO/KAGRA containers containers.ligo.org/lscsoft/lalsuite/lalsuite-v6.59:el7 From 6c2656a3ac400bd440d93b519d0f24478571337c Mon Sep 17 00:00:00 2001 From: jsteinhoff Date: Thu, 27 Jul 2023 08:59:19 +0200 Subject: [PATCH 040/162] Update docker_images.txt --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 994f1e0..8e98f3c 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -455,6 +455,7 @@ containers.ligo.org/aei-tgr/cvmfs-images/pseob:fti-latest containers.ligo.org/aei-tgr/cvmfs-images/pseob:testing containers.ligo.org/aei-tgr/cvmfs-images/pseob:envs containers.ligo.org/aei-tgr/cvmfs-images/seob-rom:latest +containers.ligo.org/aei-tgr/cvmfs-images/seob-rom:v5 containers.ligo.org/alan.knee/lal-images/lalsuite-fstatbinary:latest ghcr.io/ml4gw/hermes/tritonserver:22.12 ghcr.io/ml4gw/hermes/tritonserver:22.07 From 6b8c03066f1178a748ba1a0ce4b1c201903b7945 Mon Sep 17 00:00:00 2001 From: Zoya Vallari Date: Fri, 28 Jul 2023 17:47:32 -0700 Subject: [PATCH 041/162] updated nova container for scaled asimov studies --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index a555394..9da9953 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -385,6 +385,7 @@ ghcr.io/novaexperiment/nova-sl7-novat2k:v4_fixcosmicsrock ghcr.io/novaexperiment/nova-sl7-novat2k:v5_setasimov ghcr.io/novaexperiment/nova-sl7-novat2k:v6c_nightmareplus ghcr.io/novaexperiment/nova-sl7-novat2k:v7_pvalue +ghcr.io/novaexperiment/nova-sl7-novat2k:scaledasimov ghcr.io/novaexperiment/sl7:latest ghcr.io/novaexperiment/sl7:master ghcr.io/novaexperiment/sl7:mini From 0e006af220e6bd3ac73a593b701c5eb7dfd47263 Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Sat, 29 Jul 2023 15:21:22 -0700 Subject: [PATCH 042/162] Removed private bayeswave/igwn-wave-compare --- docker_images.txt | 1 - 1 file changed, 1 deletion(-) diff --git a/docker_images.txt b/docker_images.txt index bdcb733..2b8ed3a 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -463,7 +463,6 @@ ghcr.io/ml4gw/hermes/tritonserver:22.07 ghcr.io/ml4gw/hermes/tritonserver:22.02 ghcr.io/ml4gw/pinto:main containers.ligo.org/yannick.lecoeuche/glitch-pe-container/glitch-pe:latest -containers.ligo.org/bayeswave/igwn-wave-compare:latest # LIGO/VIRGO/KAGRA containers containers.ligo.org/lscsoft/lalsuite/lalsuite-v6.59:el7 From dc0ba59501566fd0b0c2b76140eafd5d19460024 Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Fri, 4 Aug 2023 07:47:57 -0700 Subject: [PATCH 043/162] Added back containers.ligo.org/bayeswave/igwn-wave-compare:latest --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 2b8ed3a..a1379ba 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -433,6 +433,7 @@ hub.opensciencegrid.org/htcondor/hpc-annex-pilot:el8 hub.opensciencegrid.org/htcondor/hpc-annex-pilot:latest # LIGO - user defined images +containers.ligo.org/bayeswave/igwn-wave-compare:latest containers.ligo.org/cody.messick/container:latest containers.ligo.org/joshua.willis/pycbc:latest containers.ligo.org/james-clark/bayeswave:latest From 200eb664e3777628970bf41429075843b33648b1 Mon Sep 17 00:00:00 2001 From: 4ndr85 <71553771+4ndr85@users.noreply.github.com> Date: Wed, 6 Sep 2023 10:04:37 +0100 Subject: [PATCH 044/162] Update docker_images.txt 4ndr85/mu3e:v3 added --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index a1379ba..b76305c 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -499,6 +499,7 @@ egstern/wn-synergia2:latest # Mu3e 4ndr85/mu3e:v2 +4ndr85/mu3e:v3 #NEURON+Brian2+Python rtikid/python2-numpy-scipy-sympy-neuron-brian2-netpyne-inspyred-pyabf From 66bf9d04eecffac9197f4834b38deca5296aa123 Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Fri, 22 Sep 2023 11:11:31 -0700 Subject: [PATCH 045/162] Update README.md --- README.md | 9 +++++---- 1 file changed, 5 insertions(+), 4 deletions(-) diff --git a/README.md b/README.md index ff8554c..9aaace6 100644 --- a/README.md +++ b/README.md @@ -1,6 +1,7 @@ ## CVMFS Singularly Image Repository -To add images to the repository for use on OSG, follow the instructions on the OSG -Connect documentation pages below: - - [Docker and Singularity containers](https://support.opensciencegrid.org/support/solutions/articles/12000024676-docker-and-singularity-containers#submitting-your-docker-container-to-the-open-science-grid-repository) - - [Create a Docker Container Image](https://support.opensciencegrid.org/support/solutions/articles/12000058245) +To add images to the repository for use on OSG, follow the instructions on the +documentation pages below: + + - [Containers Overview](https://portal.osg-htc.org/documentation/htc_workloads/using_software/containers-singularity/) + - [Containers - Docker](https://portal.osg-htc.org/documentation/htc_workloads/using_software/containers-docker/) From 263fd9eca89e3c82cf24179c6f1c7e4ac8b3ce58 Mon Sep 17 00:00:00 2001 From: ssgituser <46004598+ssgituser@users.noreply.github.com> Date: Wed, 11 Oct 2023 13:41:46 -0400 Subject: [PATCH 046/162] Update docker_images.txt Added amnh/herpetology-pseudo-it image --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 62d5c60..bafc4ab 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -481,6 +481,7 @@ nrstickley/jsp_apps:* #American Museum of Natural History (AMNH) amnh/osgimages:* +amnh/herpetology-pseudo-it:* # Single-cell Inference of Networks using Granger Ensembles (SINGE) agitter/singe:latest From 77128e8b617e352a5c42ca5a11eb3491249d92e1 Mon Sep 17 00:00:00 2001 From: Ian Harry Date: Thu, 12 Oct 2023 14:40:14 +0100 Subject: [PATCH 047/162] Update PyCBC LIGO images PyCBC LIGO analyses for the ongoing LIGO/Virgo/KAGRA observing run will soon get going on OSG. We will use the v2.3.X release branch for this, and so I update the images here. I remove the v2.2.X branch, as we no longer will need that. --- docker_images.txt | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docker_images.txt b/docker_images.txt index b76305c..a3058b9 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -295,7 +295,7 @@ igwn/software:stretch-proposed # LIGO PyCBC compute nodes pycbc/pycbc-el7:v1.16.12 pycbc/pycbc-el7:v1.18.3 -pycbc/pycbc-el8:v2.2.* +pycbc/pycbc-el8:v2.3.* pycbc/pycbc-el8:latest # CMS worker node From fbb276c51a53d4bfc74ca644b2fbdfa6c3047283 Mon Sep 17 00:00:00 2001 From: Benedikt Riedel Date: Mon, 16 Oct 2023 11:42:00 -0500 Subject: [PATCH 048/162] adding wipac and icecube containers --- docker_images.txt | 3 +++ 1 file changed, 3 insertions(+) diff --git a/docker_images.txt b/docker_images.txt index c1f5a5b..10d092f 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -343,6 +343,9 @@ wipac/fasig_scalable_radio_array wipac/npx-el6:latest wipac/npx-el6:test wipac/skylab:1.0.0 +wipac/pyglidein-el8-cuda11 +icecube/icetray-ml:icetray-v1.8.1-cuda11.8-cudnn8-graphnet-ubuntu22.04-devel +icecube/icetray-base:devel-rocky8-cuda11.8-cudnn8 #fMRI Prep poldracklab/fmriprep From 02d1626506d00968d22dce696c35438ae8080dc1 Mon Sep 17 00:00:00 2001 From: Benedikt Riedel Date: Mon, 16 Oct 2023 12:04:29 -0500 Subject: [PATCH 049/162] main rather than latest for wipac --- docker_images.txt | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docker_images.txt b/docker_images.txt index 10d092f..9203312 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -343,7 +343,7 @@ wipac/fasig_scalable_radio_array wipac/npx-el6:latest wipac/npx-el6:test wipac/skylab:1.0.0 -wipac/pyglidein-el8-cuda11 +wipac/pyglidein-el8-cuda11:main icecube/icetray-ml:icetray-v1.8.1-cuda11.8-cudnn8-graphnet-ubuntu22.04-devel icecube/icetray-base:devel-rocky8-cuda11.8-cudnn8 From 81d89a74d0fc652b94b03a96ba610553b0287e2e Mon Sep 17 00:00:00 2001 From: Benedikt Riedel Date: Mon, 16 Oct 2023 15:48:07 -0500 Subject: [PATCH 050/162] Adding ubuntu22.04 base image for icecube --- docker_images.txt | 2 ++ 1 file changed, 2 insertions(+) diff --git a/docker_images.txt b/docker_images.txt index 9203312..81a619f 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -346,6 +346,8 @@ wipac/skylab:1.0.0 wipac/pyglidein-el8-cuda11:main icecube/icetray-ml:icetray-v1.8.1-cuda11.8-cudnn8-graphnet-ubuntu22.04-devel icecube/icetray-base:devel-rocky8-cuda11.8-cudnn8 +icecube/icetray-base:devel-devel-ubuntu22.04-cuda11.8.0-cudnn8 + #fMRI Prep poldracklab/fmriprep From 3c9fe521ca82df8221649ed8fb4ed8ee4782b594 Mon Sep 17 00:00:00 2001 From: Benedikt Riedel Date: Mon, 16 Oct 2023 15:58:53 -0500 Subject: [PATCH 051/162] remove brain farts --- docker_images.txt | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/docker_images.txt b/docker_images.txt index 81a619f..45ebed6 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -345,8 +345,8 @@ wipac/npx-el6:test wipac/skylab:1.0.0 wipac/pyglidein-el8-cuda11:main icecube/icetray-ml:icetray-v1.8.1-cuda11.8-cudnn8-graphnet-ubuntu22.04-devel -icecube/icetray-base:devel-rocky8-cuda11.8-cudnn8 -icecube/icetray-base:devel-devel-ubuntu22.04-cuda11.8.0-cudnn8 +icecube/icetray-base:devel-rocky8-cuda11.8.0-cudnn8 +icecube/icetray-base:devel-ubuntu22.04-cuda11.8.0-cudnn8 #fMRI Prep From 8125ea61817a0f8a1bb796997f7e7741af20f75e Mon Sep 17 00:00:00 2001 From: Malik Shahzad Muzaffar Date: Wed, 8 Nov 2023 10:32:00 +0100 Subject: [PATCH 052/162] Added cmssw/el9 images --- docker_images.txt | 2 ++ 1 file changed, 2 insertions(+) diff --git a/docker_images.txt b/docker_images.txt index 45ebed6..a3d6d64 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -304,9 +304,11 @@ bbockelm/cms:rhel7 cmssw/cms:rhel6 cmssw/cms:rhel7 cmssw/cms:rhel8 +cmssw/cms:rhel9 cmssw/cms:rhel6-itb cmssw/cms:rhel7-itb cmssw/cms:rhel8-itb +cmssw/cms:rhel9-itb cmssw/cms:rhel6-m* cmssw/cms:rhel7-m* cmssw/cms:rhel8-m* From 045900c3d10b084219c7d2a25d6dea6225d62df5 Mon Sep 17 00:00:00 2001 From: Malik Shahzad Muzaffar Date: Wed, 8 Nov 2023 11:43:49 +0100 Subject: [PATCH 053/162] added cmssw/cms aarch64 and ppc64le images --- docker_images.txt | 14 ++++++++++++++ 1 file changed, 14 insertions(+) diff --git a/docker_images.txt b/docker_images.txt index a3d6d64..1922480 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -305,10 +305,24 @@ cmssw/cms:rhel6 cmssw/cms:rhel7 cmssw/cms:rhel8 cmssw/cms:rhel9 +cmssw/cms:rhel6-x86_64 +cmssw/cms:rhel7-x86_64 +cmssw/cms:rhel8-x86_64 +cmssw/cms:rhel9-x86_64 +cmssw/cms:rhel8-aarch64 +cmssw/cms:rhel9-aarch64 +cmssw/cms:rhel8-ppc64le cmssw/cms:rhel6-itb cmssw/cms:rhel7-itb cmssw/cms:rhel8-itb cmssw/cms:rhel9-itb +cmssw/cms:rhel6-itb-x86_64 +cmssw/cms:rhel7-itb-x86_64 +cmssw/cms:rhel8-itb-x86_64 +cmssw/cms:rhel9-itb-x86_64 +cmssw/cms:rhel8-itb-aarch64 +cmssw/cms:rhel9-itb-aarch64 +cmssw/cms:rhel8-itb-ppc64le cmssw/cms:rhel6-m* cmssw/cms:rhel7-m* cmssw/cms:rhel8-m* From 430ee586c45eeba30fd4c948b28f04b9a3482ac7 Mon Sep 17 00:00:00 2001 From: Dmitri Smirnov Date: Fri, 17 Nov 2023 10:09:32 -0500 Subject: [PATCH 054/162] add new release images for STAR experiment --- docker_images.txt | 2 ++ 1 file changed, 2 insertions(+) diff --git a/docker_images.txt b/docker_images.txt index 1922480..bd73933 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -628,6 +628,8 @@ ncbi/pgap:2022-04-14.build6021 # STAR experiment at Brookhaven National Lab images ghcr.io/star-bnl/star-sw +ghcr.io/star-bnl/star-sw:SL23f +ghcr.io/star-bnl/star-sw:SL23e ghcr.io/star-bnl/star-sw:SL23d ghcr.io/star-bnl/star-sw:SL23c ghcr.io/star-bnl/star-sw:SL23b From 7bfb0c9e329d7a4d8cf2d0ef91998ca8ab5ef650 Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Mon, 4 Dec 2023 09:47:00 -0800 Subject: [PATCH 055/162] Added new tensorflow and scikit-learn images --- docker_images.txt | 2 ++ 1 file changed, 2 insertions(+) diff --git a/docker_images.txt b/docker_images.txt index bd73933..e859116 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -50,6 +50,8 @@ hub.opensciencegrid.org/htc/matlab-runtime:R2023a hub.opensciencegrid.org/htc/rocky:8 hub.opensciencegrid.org/htc/rocky:9 hub.opensciencegrid.org/htc/rocky:8-cuda-11.0.3 +hub.opensciencegrid.org/htc/scikit-learn:1.3 +hub.opensciencegrid.org/htc/tensorflow:2.15 hub.opensciencegrid.org/htc/ubuntu:20.04 hub.opensciencegrid.org/htc/ubuntu:22.04 From baa7779f889c0498e96aad8f9d6d7d8951495ef4 Mon Sep 17 00:00:00 2001 From: ssgituser <46004598+ssgituser@users.noreply.github.com> Date: Tue, 12 Dec 2023 15:09:33 -0500 Subject: [PATCH 056/162] Update docker_images.txt --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index e859116..fff7311 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -550,6 +550,7 @@ nrstickley/jsp_apps:* #American Museum of Natural History (AMNH) amnh/osgimages:* amnh/herpetology-pseudo-it:* +amnh/herpetology_iqtree_r_quibl:* # Single-cell Inference of Networks using Granger Ensembles (SINGE) agitter/singe:latest From bc726b42d2924ce0b2555be025b8065c6cff0d24 Mon Sep 17 00:00:00 2001 From: Marco Mambelli Date: Sat, 27 Jan 2024 20:40:54 -0600 Subject: [PATCH 057/162] Added Fermilab EL9 worker node --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index fff7311..e524760 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -412,6 +412,7 @@ brainlife/mcr:neurodebian1604-r2017a brainlife/mcr:r2019a # Fermilab VO - Fermigrid worker nodes +fermilab/fnal-wn-el9:* fermilab/fnal-wn-el8:* fermilab/fnal-wn-sl7:* fermilab/fnal-wn-sl6:* From 5815d5a5da31eab78b010823fdc82de4826cd286 Mon Sep 17 00:00:00 2001 From: Justin Hiemstra Date: Mon, 5 Feb 2024 10:49:43 -0600 Subject: [PATCH 058/162] Add SPRAS project containers These containers are wrappers on other people's code, and they are to be run inside of another container. To get around the lack of availability of `fuse` on OSPool EPs, it was suggested that we have these containers unpacked in CVMFS. --- docker_images.txt | 14 ++++++++++++++ 1 file changed, 14 insertions(+) diff --git a/docker_images.txt b/docker_images.txt index e524760..bb9b45c 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -624,6 +624,20 @@ jcha40/python_env:latest # University of Wisconsin - Jason Kwan Lab jasonkwan/autometa:latest +# UW-Madison & Reed College -- Gitter Lab, SPRAS project +# https://hub.docker.com/r/reedcompbio +reedcompbio/omics-integrator-1:latest +reedcompbio/omics-integrator-1:no-conda +reedcompbio/omics-integrator-2:v2 +reedcompbio/pathlinker:latest +reedcompbio/meo:latest +reedcompbio/mincostflow:latest +reedcompbio/domino:latest +reedcompbio/allpairs:latest +reedcompbio/py4cytoscape:v2 +reedcompbio/tiedie:latest +reedcompbio/random-walk-with-restart:latest + # Network for Computational Modeling in the Social and Ecological Sciences (CoMSES Net, https://comses.net) images comses/osg-netlogo:* From fe867823035389cd6d0ea92b2e0ea3526130d701 Mon Sep 17 00:00:00 2001 From: Matyas Selmeci Date: Mon, 5 Feb 2024 14:39:06 -0600 Subject: [PATCH 059/162] Remove lalsuite-dev:stretch The image has been removed from Docker Hub. Confirmed with @josh-willis over Slack. --- docker_images.txt | 1 - 1 file changed, 1 deletion(-) diff --git a/docker_images.txt b/docker_images.txt index bb9b45c..325fbbd 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -288,7 +288,6 @@ cyverse/rsem-prepare # IGWN (Internation Gravitational Wave Network) worker nodes igwn/lalsuite-dev:el7 -igwn/lalsuite-dev:stretch igwn/software:el7 igwn/software:el7-testing igwn/software:stretch From b3518786936a01001dcffba7368ba6136d66d9ee Mon Sep 17 00:00:00 2001 From: James Alexander Clark Date: Wed, 3 Jan 2024 13:46:12 -0500 Subject: [PATCH 060/162] Add a GPU burn image for IGWN pool testing --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 325fbbd..a2f3f33 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -487,6 +487,7 @@ ghcr.io/ml4gw/hermes/tritonserver:22.07 ghcr.io/ml4gw/hermes/tritonserver:22.02 ghcr.io/ml4gw/pinto:main containers.ligo.org/yannick.lecoeuche/glitch-pe-container/glitch-pe:latest +containers.ligo.org/computing/distributed/igwn-pool-exorciser/gpu_burn:latest # LIGO/VIRGO/KAGRA containers containers.ligo.org/lscsoft/lalsuite/lalsuite-v6.59:el7 From 12931084bd9c749fc80e0cbd7fd4572eb431b0fe Mon Sep 17 00:00:00 2001 From: Wouter Deconinck Date: Tue, 13 Feb 2024 16:27:52 -0800 Subject: [PATCH 061/162] Updates to EIC container images --- docker_images.txt | 6 ++---- 1 file changed, 2 insertions(+), 4 deletions(-) diff --git a/docker_images.txt b/docker_images.txt index a2f3f33..f05d6bf 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -273,12 +273,10 @@ alpine whit2333/eic-slic:latest argonneeic/evochain:v* argonneeic/fpadsim:v* -electronioncollider/escalate:latest eicweb/jug_xl:*-stable -eicweb/jug_xl:*-beta -eicweb/jug_xl:*-alpha -eicweb/jug_xl:testing eicweb/jug_xl:nightly +eicweb/eic_xl:*-stable +eicweb/eic_xl:nightly raygunkennesaw/tensorflow:1.2.0-py3 # Common biology tools From 875f67482a0b7a4636e72902ab969bc7505cce0f Mon Sep 17 00:00:00 2001 From: Eremey Valetov Date: Tue, 20 Feb 2024 15:55:47 -0700 Subject: [PATCH 062/162] Add glyfada optimiser, update affiliation --- docker_images.txt | 10 ++++++---- 1 file changed, 6 insertions(+), 4 deletions(-) diff --git a/docker_images.txt b/docker_images.txt index f05d6bf..ec5daa7 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -505,12 +505,14 @@ containers.ligo.org/snax/snax:v0.5.2 containers.ligo.org/lmxbcrosscorr/containers:crosscorr-lattice-dev-clean containers.ligo.org/echoes-model-independent/bayeswave-echoes-image:v1.0.7_echoes_reviewed -# Lancaster U Muon g-2 Beamline Simulations -valetov/g4bl:* +# Lancaster U, Muon g-2 Beamline Simulations valetov/beam_track:* -valetov/gm2dev:* + +# Michigan State U, Center for Beam Theory and Dynamical Systems valetov/cosy:* -engineren/calogan-docker:latest +valetov/g4bl:* +valetov/gm2dev:* +valetov/glyfada:* # Mu2e egstern/centos7-synergia2:* From 86355798a7ca4be47bf97bebaa009199592cb307 Mon Sep 17 00:00:00 2001 From: Marco Mambelli Date: Tue, 12 Mar 2024 08:36:38 -0500 Subject: [PATCH 063/162] Added Fermilab SL7 development image The SL7 development image will be used by experiments to build and maintain SL7 software --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index ec5daa7..2c0ccdb 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -413,6 +413,7 @@ fermilab/fnal-wn-el9:* fermilab/fnal-wn-el8:* fermilab/fnal-wn-sl7:* fermilab/fnal-wn-sl6:* +fermilab/fnal-dev-sl7:* fermilab/benchmark:* # NOvA Experiment From 3c3f7c41bcc3105d2abb4eb839ad5a78796cb268 Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Tue, 26 Mar 2024 08:27:22 -0700 Subject: [PATCH 064/162] Added gromacs:2023.4 --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 2c0ccdb..86d0576 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -46,6 +46,7 @@ opensciencegrid/osg-wn:3.3-devel-el7 # htc/ - this are the images replacing the osgvo-* ones hub.opensciencegrid.org/htc/centos:7 hub.opensciencegrid.org/htc/debian:12 +hub.opensciencegrid.org/htc/gromacs:2023.4 hub.opensciencegrid.org/htc/matlab-runtime:R2023a hub.opensciencegrid.org/htc/rocky:8 hub.opensciencegrid.org/htc/rocky:9 From 01b8ec895a0a1630cf178e2cf3877dfe0685fbe4 Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Fri, 14 Jun 2024 10:31:56 -0700 Subject: [PATCH 065/162] Added Gromacs 2024.2 --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 86d0576..5b2e26d 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -47,6 +47,7 @@ opensciencegrid/osg-wn:3.3-devel-el7 hub.opensciencegrid.org/htc/centos:7 hub.opensciencegrid.org/htc/debian:12 hub.opensciencegrid.org/htc/gromacs:2023.4 +hub.opensciencegrid.org/htc/gromacs:2024.2 hub.opensciencegrid.org/htc/matlab-runtime:R2023a hub.opensciencegrid.org/htc/rocky:8 hub.opensciencegrid.org/htc/rocky:9 From 461fea130211f52c027261ec1ad192d196e13f28 Mon Sep 17 00:00:00 2001 From: Rajiv Mayani Date: Mon, 24 Jun 2024 15:00:35 -0700 Subject: [PATCH 066/162] Update docker_images.txt Add two repositories for PosEiDon. --- docker_images.txt | 4 ++++ 1 file changed, 4 insertions(+) diff --git a/docker_images.txt b/docker_images.txt index 5b2e26d..347f1b7 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -671,3 +671,7 @@ redtopexp/redtop:* # FIU_Hamid FPHLM houpengg/fphlm:* + +# PosEiDon +pegasus/1000genome-workflow:latest +pegasus/montage-workflow-v3:latest From 76f12e283240cf651d46bb64d029bcfe59be9837 Mon Sep 17 00:00:00 2001 From: James Alexander Clark Date: Wed, 17 Jul 2024 18:18:14 -0400 Subject: [PATCH 067/162] An additional fork of the LIGO RIFT analysis using 3rd party waveform models for eccentric orbits --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 347f1b7..20f8294 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -466,6 +466,7 @@ containers.ligo.org/james-clark/bilby_pipe_public:latest containers.ligo.org/james-clark/research-projects-rit/rift:test containers.ligo.org/james-clark/research-projects-rit/rift:latest containers.ligo.org/james-clark/research-projects-rit/rift:production +containers.ligo.org/james-clark/research-projects-rit/containers-rift_o4b_jl-chadhenshaw-teobresums_eccentric:latest containers.ligo.org/rodrigo.tenorio/skyhough-post-processing:master containers.ligo.org/tessa.carver/pygrb_o3a:latest atanasi/matlab:v97 From 68f6d28d3cdbbdff85725df06cab51a637f48317 Mon Sep 17 00:00:00 2001 From: Nicholas Cooley <39340402+npcooley@users.noreply.github.com> Date: Fri, 26 Jul 2024 11:54:03 -0400 Subject: [PATCH 068/162] Update docker_images.txt editing containers, removing two older un-used containers, and adding one --- docker_images.txt | 3 +-- 1 file changed, 1 insertion(+), 2 deletions(-) diff --git a/docker_images.txt b/docker_images.txt index 20f8294..d90f0b4 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -181,8 +181,7 @@ nkern/21cmfast_env npanicker/r-desolve:* npavlovikj/prokevo:latest npcooley/heron:latest -npcooley/deepec:latest -npcooley/phylosim:latest +npcooley/esmfold:* npcooley/synextend:* docker.opencarp.org/opencarp/opencarp:latest parabola505/geospatxgboost:* From 731c5b8a0af7d34183b70c4933cbf9f9ae997cd6 Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Tue, 6 Aug 2024 10:40:34 -0700 Subject: [PATCH 069/162] Added htc/ubuntu:24.04 --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index d90f0b4..195496d 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -56,6 +56,7 @@ hub.opensciencegrid.org/htc/scikit-learn:1.3 hub.opensciencegrid.org/htc/tensorflow:2.15 hub.opensciencegrid.org/htc/ubuntu:20.04 hub.opensciencegrid.org/htc/ubuntu:22.04 +hub.opensciencegrid.org/htc/ubuntu:24.04 # OSGVO opensciencegrid/npjoodi From f6fd61859ba4b889435cb3e5d47d4647248f5be0 Mon Sep 17 00:00:00 2001 From: Paolo Beltrame Date: Wed, 21 Aug 2024 13:22:21 +0100 Subject: [PATCH 070/162] Paolo First commit from version v20240810 --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 195496d..22036c9 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -528,6 +528,7 @@ egstern/wn-synergia2:latest # Mu3e 4ndr85/mu3e:v2 4ndr85/mu3e:v3 +paolobeltrame/mu3e:v20240810 #NEURON+Brian2+Python rtikid/python2-numpy-scipy-sympy-neuron-brian2-netpyne-inspyred-pyabf From ca56a01c1df6e164703fe02d8d21bb95f5627828 Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Thu, 5 Sep 2024 07:25:32 -0700 Subject: [PATCH 071/162] Added htc/rocky:9-cuda-12.6.0 --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 22036c9..a2ce76b 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -52,6 +52,7 @@ hub.opensciencegrid.org/htc/matlab-runtime:R2023a hub.opensciencegrid.org/htc/rocky:8 hub.opensciencegrid.org/htc/rocky:9 hub.opensciencegrid.org/htc/rocky:8-cuda-11.0.3 +hub.opensciencegrid.org/htc/rocky:9-cuda-12.6.0 hub.opensciencegrid.org/htc/scikit-learn:1.3 hub.opensciencegrid.org/htc/tensorflow:2.15 hub.opensciencegrid.org/htc/ubuntu:20.04 From 356345ef2d381197803c5ef479e95dfde4ac0c5c Mon Sep 17 00:00:00 2001 From: Paolo Beltrame Date: Mon, 16 Sep 2024 12:05:05 +0100 Subject: [PATCH 072/162] Paolo commit mu3e:v0 --- docker_images.txt | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docker_images.txt b/docker_images.txt index 22036c9..86e57ff 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -528,7 +528,7 @@ egstern/wn-synergia2:latest # Mu3e 4ndr85/mu3e:v2 4ndr85/mu3e:v3 -paolobeltrame/mu3e:v20240810 +paolobeltrame/mu3e:v0 #NEURON+Brian2+Python rtikid/python2-numpy-scipy-sympy-neuron-brian2-netpyne-inspyred-pyabf From 11c6140ae097f2254a45fa76fa46a4c115bd2336 Mon Sep 17 00:00:00 2001 From: Paolo Beltrame Date: Wed, 18 Sep 2024 15:36:53 +0100 Subject: [PATCH 073/162] Paolo commit mu3e:v0t --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 86e57ff..973863c 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -529,6 +529,7 @@ egstern/wn-synergia2:latest 4ndr85/mu3e:v2 4ndr85/mu3e:v3 paolobeltrame/mu3e:v0 +paolobeltrame/mu3e:v0t #NEURON+Brian2+Python rtikid/python2-numpy-scipy-sympy-neuron-brian2-netpyne-inspyred-pyabf From 60095236f3651d9ffa8828950171496168d42808 Mon Sep 17 00:00:00 2001 From: Paolo Beltrame Date: Thu, 19 Sep 2024 19:24:04 +0100 Subject: [PATCH 074/162] Paolo commit mu3e:v1 no CUDA --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 973863c..02fb964 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -530,6 +530,7 @@ egstern/wn-synergia2:latest 4ndr85/mu3e:v3 paolobeltrame/mu3e:v0 paolobeltrame/mu3e:v0t +paolobeltrame/mu3e:v1 #NEURON+Brian2+Python rtikid/python2-numpy-scipy-sympy-neuron-brian2-netpyne-inspyred-pyabf From c10d4a3e81b7e7b28aaa316c263974fc95623309 Mon Sep 17 00:00:00 2001 From: Paolo Beltrame Date: Fri, 4 Oct 2024 13:26:18 +0100 Subject: [PATCH 075/162] Paolo commit for analysis codes v0 --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 02fb964..8273b00 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -531,6 +531,7 @@ egstern/wn-synergia2:latest paolobeltrame/mu3e:v0 paolobeltrame/mu3e:v0t paolobeltrame/mu3e:v1 +paolobeltrame/mu3eana:v0 #NEURON+Brian2+Python rtikid/python2-numpy-scipy-sympy-neuron-brian2-netpyne-inspyred-pyabf From 849bf86480ccdd21f63c44cfcea3fb9de12f28e6 Mon Sep 17 00:00:00 2001 From: Ethan Jacob Marx Date: Fri, 4 Oct 2024 11:32:50 -0700 Subject: [PATCH 076/162] add triton container --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 69a25d0..b170234 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -488,6 +488,7 @@ containers.ligo.org/alan.knee/lal-images/lalsuite-fstatbinary:latest ghcr.io/ml4gw/hermes/tritonserver:22.12 ghcr.io/ml4gw/hermes/tritonserver:22.07 ghcr.io/ml4gw/hermes/tritonserver:22.02 +ghcr.io/ml4gw/hermes/tritonserver:24.01 ghcr.io/ml4gw/pinto:main containers.ligo.org/yannick.lecoeuche/glitch-pe-container/glitch-pe:latest containers.ligo.org/computing/distributed/igwn-pool-exorciser/gpu_burn:latest From bff91f792077dd58a540ebc2656aa891ebdb7597 Mon Sep 17 00:00:00 2001 From: Ethan Jacob Marx Date: Sat, 5 Oct 2024 05:09:36 -0700 Subject: [PATCH 077/162] add triton 23.01 --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 37beacc..bf87fa8 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -488,6 +488,7 @@ containers.ligo.org/alan.knee/lal-images/lalsuite-fstatbinary:latest ghcr.io/ml4gw/hermes/tritonserver:22.12 ghcr.io/ml4gw/hermes/tritonserver:22.07 ghcr.io/ml4gw/hermes/tritonserver:22.02 +ghcr.io/ml4gw/hermes/tritonserver:23.01 ghcr.io/ml4gw/hermes/tritonserver:24.01 ghcr.io/ml4gw/pinto:main containers.ligo.org/yannick.lecoeuche/glitch-pe-container/glitch-pe:latest From 952863ccbdc065d4aace1a35dfa2388cf60fa7fd Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Tue, 8 Oct 2024 13:57:28 -0700 Subject: [PATCH 078/162] Added deeplabcut:3.0.0rc4 --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index bf87fa8..101f38f 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -46,6 +46,7 @@ opensciencegrid/osg-wn:3.3-devel-el7 # htc/ - this are the images replacing the osgvo-* ones hub.opensciencegrid.org/htc/centos:7 hub.opensciencegrid.org/htc/debian:12 +hub.opensciencegrid.org/htc/deeplabcut:3.0.0rc4 hub.opensciencegrid.org/htc/gromacs:2023.4 hub.opensciencegrid.org/htc/gromacs:2024.2 hub.opensciencegrid.org/htc/matlab-runtime:R2023a From 3da967004caffbde8c8ecc16041bb24620756cc7 Mon Sep 17 00:00:00 2001 From: Alexander Austregesilo Date: Thu, 10 Oct 2024 10:14:08 -0400 Subject: [PATCH 079/162] new container based on almalinux9 --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index e87c63d..9b3961d 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -305,6 +305,7 @@ markito3/gluex_docker_devel markito3/gluex_docker_prod jeffersonlab/gluex_prod:v1 jeffersonlab/gluex_devel:latest +jeffersonlab/gluex_almalinux_9:latest # WIPAC (IceCube) wipac/fasig_scalable_radio_array From 3c8eb436e26f6ed9afc999ca525f56a93fb6e28e Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Fri, 11 Oct 2024 10:59:21 -0700 Subject: [PATCH 080/162] Added pytorch:2.3.1-cuda11.8 --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 26ece56..ea10276 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -50,6 +50,7 @@ hub.opensciencegrid.org/htc/deeplabcut:3.0.0rc4 hub.opensciencegrid.org/htc/gromacs:2023.4 hub.opensciencegrid.org/htc/gromacs:2024.2 hub.opensciencegrid.org/htc/matlab-runtime:R2023a +hub.opensciencegrid.org/htc/pytorch:2.3.1-cuda11.8 hub.opensciencegrid.org/htc/rocky:8 hub.opensciencegrid.org/htc/rocky:9 hub.opensciencegrid.org/htc/rocky:8-cuda-11.0.3 From ed7cc0e3f530862862f640293c987055962f40ee Mon Sep 17 00:00:00 2001 From: Colm Talbot Date: Fri, 11 Oct 2024 14:56:40 -0400 Subject: [PATCH 081/162] Add bilby_pipe image for testing --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index ea10276..5cf6d85 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -496,6 +496,7 @@ ghcr.io/ml4gw/hermes/tritonserver:24.01 ghcr.io/ml4gw/pinto:main containers.ligo.org/yannick.lecoeuche/glitch-pe-container/glitch-pe:latest containers.ligo.org/computing/distributed/igwn-pool-exorciser/gpu_burn:latest +containers.ligo.org/colm.talbot/bilby-pipe-image-sandbox/bilby-pipe-production-python311:latest # LIGO/VIRGO/KAGRA containers containers.ligo.org/lscsoft/lalsuite/lalsuite-v6.59:el7 From f135ea6d3c348cf1b047048225c410f8becff27a Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Tue, 22 Oct 2024 13:15:31 -0700 Subject: [PATCH 082/162] Added htc/minimal:0 --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 5cf6d85..22ec748 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -50,6 +50,7 @@ hub.opensciencegrid.org/htc/deeplabcut:3.0.0rc4 hub.opensciencegrid.org/htc/gromacs:2023.4 hub.opensciencegrid.org/htc/gromacs:2024.2 hub.opensciencegrid.org/htc/matlab-runtime:R2023a +hub.opensciencegrid.org/htc/minimal:0 hub.opensciencegrid.org/htc/pytorch:2.3.1-cuda11.8 hub.opensciencegrid.org/htc/rocky:8 hub.opensciencegrid.org/htc/rocky:9 From 8fec01ecfaa87fce67ab22e8aed15555a262cd9f Mon Sep 17 00:00:00 2001 From: cortp <104941927+cortp@users.noreply.github.com> Date: Tue, 5 Nov 2024 15:21:53 -0500 Subject: [PATCH 083/162] Add gstlal containers --- docker_images.txt | 4 ++++ 1 file changed, 4 insertions(+) diff --git a/docker_images.txt b/docker_images.txt index 22ec748..8130a22 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -512,6 +512,10 @@ containers.ligo.org/lscsoft/bayeswave:v1.0.7 containers.ligo.org/computing/rucio/containers/rucio-clients:latest containers.ligo.org/lscsoft/gstlal:master containers.ligo.org/lscsoft/gstlal:osg-dev +containers.ligo.org/gstlal/o4a-containers:cvmfs1 +containers.ligo.org/gstlal/o4a-containers:cvmfs2 +containers.ligo.org/gstlal/o4b-containers:cvmfs1 +containers.ligo.org/gstlal/o4b-containers:cvmfs2 containers.ligo.org/snax/snax:v0.5.1 containers.ligo.org/snax/snax:v0.5.2 containers.ligo.org/lmxbcrosscorr/containers:crosscorr-lattice-dev-clean From 3117d3d1ff3d1fa08dde884d11d5689629084b0e Mon Sep 17 00:00:00 2001 From: Colm Talbot Date: Thu, 21 Nov 2024 12:06:07 -0600 Subject: [PATCH 084/162] Add gwpopulation image --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 8130a22..1ffb388 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -498,6 +498,7 @@ ghcr.io/ml4gw/pinto:main containers.ligo.org/yannick.lecoeuche/glitch-pe-container/glitch-pe:latest containers.ligo.org/computing/distributed/igwn-pool-exorciser/gpu_burn:latest containers.ligo.org/colm.talbot/bilby-pipe-image-sandbox/bilby-pipe-production-python311:latest +containers.ligo.org/colm.talbot/bilby-pipe-image-sandbox/gwpopulation-python311:latest # LIGO/VIRGO/KAGRA containers containers.ligo.org/lscsoft/lalsuite/lalsuite-v6.59:el7 From 54f078a8298cc5ca617323e7e4676379645f08bb Mon Sep 17 00:00:00 2001 From: Paolo Beltrame Date: Tue, 26 Nov 2024 13:00:53 +0000 Subject: [PATCH 085/162] New tag mu3esim:v5.3 corresponding to the new Mu3e Tag --- docker_images.txt | 3 +-- 1 file changed, 1 insertion(+), 2 deletions(-) diff --git a/docker_images.txt b/docker_images.txt index 8273b00..97caf96 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -528,9 +528,8 @@ egstern/wn-synergia2:latest # Mu3e 4ndr85/mu3e:v2 4ndr85/mu3e:v3 -paolobeltrame/mu3e:v0 paolobeltrame/mu3e:v0t -paolobeltrame/mu3e:v1 +paolobeltrame/mu3esim:v5.3 paolobeltrame/mu3eana:v0 #NEURON+Brian2+Python From 1945e28088b6df7d8349c4ea86620b1961141971 Mon Sep 17 00:00:00 2001 From: Paolo Beltrame Date: Thu, 28 Nov 2024 15:50:56 +0000 Subject: [PATCH 086/162] Commit mu3e code (sim and ana), mu3esim v5.4 with GEAN4 v11.1.2 --- docker_images.txt | 4 +--- 1 file changed, 1 insertion(+), 3 deletions(-) diff --git a/docker_images.txt b/docker_images.txt index 97caf96..eb0e0f9 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -528,9 +528,7 @@ egstern/wn-synergia2:latest # Mu3e 4ndr85/mu3e:v2 4ndr85/mu3e:v3 -paolobeltrame/mu3e:v0t -paolobeltrame/mu3esim:v5.3 -paolobeltrame/mu3eana:v0 +paolobeltrame/mu3e:v5.4 #NEURON+Brian2+Python rtikid/python2-numpy-scipy-sympy-neuron-brian2-netpyne-inspyred-pyabf From 29399e1fda1e16f5998e93889d81ccb8eaa659f7 Mon Sep 17 00:00:00 2001 From: Paolo Beltrame Date: Mon, 2 Dec 2024 17:03:39 +0000 Subject: [PATCH 087/162] Mu3e v5.4 with GEANT4 11.1.2 --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index eb0e0f9..e172469 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -528,6 +528,7 @@ egstern/wn-synergia2:latest # Mu3e 4ndr85/mu3e:v2 4ndr85/mu3e:v3 +paolobeltrame/mu3esim:v5.3 paolobeltrame/mu3e:v5.4 #NEURON+Brian2+Python From 2109a419d47fa9e4af7dfc1652a628a61279131e Mon Sep 17 00:00:00 2001 From: Paolo Beltrame Date: Fri, 6 Dec 2024 16:24:52 +0100 Subject: [PATCH 088/162] Paolo commit mu3e:v5.4 for 2 layer setup --- docker_images.txt | 1 - 1 file changed, 1 deletion(-) diff --git a/docker_images.txt b/docker_images.txt index e172469..eb0e0f9 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -528,7 +528,6 @@ egstern/wn-synergia2:latest # Mu3e 4ndr85/mu3e:v2 4ndr85/mu3e:v3 -paolobeltrame/mu3esim:v5.3 paolobeltrame/mu3e:v5.4 #NEURON+Brian2+Python From e5a2ee63875314b5f0c6a90fa2c63d287f65df9b Mon Sep 17 00:00:00 2001 From: Tomek Baka <100429309+corvus314@users.noreply.github.com> Date: Mon, 16 Dec 2024 14:58:50 +0100 Subject: [PATCH 089/162] Update lvk docker_images.txt --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 5d6cc3b..3ecf066 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -499,6 +499,7 @@ containers.ligo.org/yannick.lecoeuche/glitch-pe-container/glitch-pe:latest containers.ligo.org/computing/distributed/igwn-pool-exorciser/gpu_burn:latest containers.ligo.org/colm.talbot/bilby-pipe-image-sandbox/bilby-pipe-production-python311:latest containers.ligo.org/colm.talbot/bilby-pipe-image-sandbox/gwpopulation-python311:latest +containers.ligo.org/tomasz.baka/tgr-docker-image/bilby_tgr:latest # LIGO/VIRGO/KAGRA containers containers.ligo.org/lscsoft/lalsuite/lalsuite-v6.59:el7 From d7eefc47ce409b792130186247de68baba37ca57 Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Thu, 9 Jan 2025 10:45:27 -0800 Subject: [PATCH 090/162] Added devinbayly/ros_noetic_ouster:latest --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 3ecf066..ffae4a1 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -158,6 +158,7 @@ efajardo/osgvo-nsides:latest efajardo/astroflow:latest evbauer/mesa_lean:10108.01 evbauer/mesa_lean:r22.05.1.01 +ghcr.io/devinbayly/ros_noetic_ouster:latest grassla/osg_testing:latest goodgolden5/randy:6.0 goodgolden5/randy:7.0 From 7b835bd92b4d694410360389d14588fca087c066 Mon Sep 17 00:00:00 2001 From: "deanna.fernando" Date: Mon, 13 Jan 2025 08:56:55 -0500 Subject: [PATCH 091/162] Added rift-container to CVMFS publishing via the OSG --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index ffae4a1..7980a8f 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -232,6 +232,7 @@ biocontainers/vcftools:v0.1.16-1-deb_cv1 rhughwhite/minimac3:2.0.1 biocontainers/minimac4:v1.0.0-2-deb_cv1 nnesquivelr/decam_proc_base:* +dxando/rift-container:latest # Geant4 simulation and analysis tools physino/gears From 0ed76c2812d4054d1c3dc40d9e12db01b2580b64 Mon Sep 17 00:00:00 2001 From: Paolo Beltrame Date: Thu, 16 Jan 2025 11:33:33 +0000 Subject: [PATCH 092/162] Paolo commit mu3e:v5.4_cosmic2L --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index eb0e0f9..1c77450 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -529,6 +529,7 @@ egstern/wn-synergia2:latest 4ndr85/mu3e:v2 4ndr85/mu3e:v3 paolobeltrame/mu3e:v5.4 +paolobeltrame/mu3e:v5.4_cosmic2L #NEURON+Brian2+Python rtikid/python2-numpy-scipy-sympy-neuron-brian2-netpyne-inspyred-pyabf From 3d03c363dd8567b80d1445f780951f5759951e04 Mon Sep 17 00:00:00 2001 From: Paolo Beltrame Date: Thu, 16 Jan 2025 17:16:39 +0000 Subject: [PATCH 093/162] Paolo commit paolobeltrame/mu3e:v5.4_cosm2L - Tiles and Fibres added --- docker_images.txt | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docker_images.txt b/docker_images.txt index 1c77450..4981468 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -529,7 +529,7 @@ egstern/wn-synergia2:latest 4ndr85/mu3e:v2 4ndr85/mu3e:v3 paolobeltrame/mu3e:v5.4 -paolobeltrame/mu3e:v5.4_cosmic2L +paolobeltrame/mu3e:v5.4_cosm2L #NEURON+Brian2+Python rtikid/python2-numpy-scipy-sympy-neuron-brian2-netpyne-inspyred-pyabf From 0de3b34bb1af27422941cead79cabb6309502947 Mon Sep 17 00:00:00 2001 From: "Marvin V. Ascencio S." Date: Wed, 22 Jan 2025 01:11:11 -0600 Subject: [PATCH 094/162] Update docker_images.txt adding a g4bnb container --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 7980a8f..fa88255 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -233,6 +233,7 @@ rhughwhite/minimac3:2.0.1 biocontainers/minimac4:v1.0.0-2-deb_cv1 nnesquivelr/decam_proc_base:* dxando/rift-container:latest +mascencio/al9g4bnb:latest # Geant4 simulation and analysis tools physino/gears From 37fd14371474373fa69ca8c76bcfebd4621d8e37 Mon Sep 17 00:00:00 2001 From: Paolo Beltrame Date: Wed, 22 Jan 2025 17:57:04 +0100 Subject: [PATCH 095/162] Adding v5.4_cosm2L --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 4981468..8379ed2 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -528,6 +528,7 @@ egstern/wn-synergia2:latest # Mu3e 4ndr85/mu3e:v2 4ndr85/mu3e:v3 +paolobeltrame/mu3e:v5.1 paolobeltrame/mu3e:v5.4 paolobeltrame/mu3e:v5.4_cosm2L From 8a8a15385bfd678166d793b5b25c0023151a0865 Mon Sep 17 00:00:00 2001 From: Luke Kreczko Date: Fri, 24 Jan 2025 12:31:59 +0000 Subject: [PATCH 096/162] add EL9 images for LZ experiment --- docker_images.txt | 2 ++ 1 file changed, 2 insertions(+) diff --git a/docker_images.txt b/docker_images.txt index f26691e..c3b2d82 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -596,6 +596,8 @@ jinnian/automl-osg:2dunet # LUX-ZEPLIN (LZ) Base OS luxzeplin/base_os:centos7 +luxzeplin/base_os:rocky9_3 +luxzeplin/offline_hosted:rocky9_3 #Jetscape bardelch/jetscape-deploy:* From bfa5902216b665b577947a48e2f3925286cf4dbe Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Fri, 24 Jan 2025 08:06:10 -0800 Subject: [PATCH 097/162] Fixes retagged/removed containers --- docker_images.txt | 5 ++--- 1 file changed, 2 insertions(+), 3 deletions(-) diff --git a/docker_images.txt b/docker_images.txt index c3b2d82..ba3e66c 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -178,7 +178,7 @@ k3jph/torch-diffeq:latest k3jph/python-optimization:latest leofang/cthyb-ohmic m8zeng/julia-packages -hub.opensciencegrid.org/matyasosg/testimage:latest +hub.opensciencegrid.org/matyasosg/testimage:v3 mfrayer/perl-stats molssi/qcarchive_worker_openff:* nathanjmcl/gpaw-vdw-repository:latest @@ -220,11 +220,10 @@ xwcl/xpipeline:* yxfu93/julia:latest ppaschos/koto-dev:latest chiehlin0212/koto-dev:latest -sickleinafrica/plink2:latest sickleinafrica/bcftools:1.11 sickleinafrica/plink1.9:1.9 sickleinafrica/r-tidyverse-qqman:latest -sickleinafrica/beagle:latest +sickleinafrica/beagle:5.4 sickleinafrica/eagle2:latest lifebitai/shapeit4:latest lifebitai/impute2:latest From 390fc62624c4b7fc0ee02330c80ddd8db0051a4d Mon Sep 17 00:00:00 2001 From: Paolo Beltrame Date: Sun, 9 Feb 2025 12:43:12 +0000 Subject: [PATCH 098/162] Mu3e Sim v5.4 with the option of running Mu3e 2Layer configuration --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 8379ed2..58bef77 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -530,6 +530,7 @@ egstern/wn-synergia2:latest 4ndr85/mu3e:v3 paolobeltrame/mu3e:v5.1 paolobeltrame/mu3e:v5.4 +paolobeltrame/mu3e:v5.42L paolobeltrame/mu3e:v5.4_cosm2L #NEURON+Brian2+Python From 6c87ccded972a07b379351a72ec62a3a866703d6 Mon Sep 17 00:00:00 2001 From: Paolo Beltrame Date: Wed, 12 Feb 2025 18:26:21 +0000 Subject: [PATCH 099/162] Mu3e Sim v5.4 for 2 Layer configuration and different rates for cosmic events --- docker_images.txt | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docker_images.txt b/docker_images.txt index 58bef77..25802e5 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -531,7 +531,7 @@ egstern/wn-synergia2:latest paolobeltrame/mu3e:v5.1 paolobeltrame/mu3e:v5.4 paolobeltrame/mu3e:v5.42L -paolobeltrame/mu3e:v5.4_cosm2L +paolobeltrame/mu3e:v5.4cosm2L #NEURON+Brian2+Python rtikid/python2-numpy-scipy-sympy-neuron-brian2-netpyne-inspyred-pyabf From f49daccc618dbfae249287343bacd9b4009bc502 Mon Sep 17 00:00:00 2001 From: Samuel Blechman <112599108+samblechman@users.noreply.github.com> Date: Thu, 13 Feb 2025 17:18:10 -0500 Subject: [PATCH 100/162] Update docker_images.txt added h2oai docker image --- docker_images.txt | 3 +++ 1 file changed, 3 insertions(+) diff --git a/docker_images.txt b/docker_images.txt index 1532ed8..b05e28b 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -698,3 +698,6 @@ houpengg/fphlm:* # PosEiDon pegasus/1000genome-workflow:latest pegasus/montage-workflow-v3:latest + +# h2oai +h2oai/h2o-open-source-k8s:latest From efdddaa4d657264895de3f4456926cd85ecc0c63 Mon Sep 17 00:00:00 2001 From: Paolo Beltrame Date: Fri, 21 Feb 2025 16:13:34 +0000 Subject: [PATCH 101/162] Mu3e Sim for 2 Layer with the MC track tree --- docker_images.txt | 4 +--- 1 file changed, 1 insertion(+), 3 deletions(-) diff --git a/docker_images.txt b/docker_images.txt index 25802e5..4dafc6d 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -1,4 +1,3 @@ - # This file is a list of Docker images to synchronize to singularity.opensciencegrid.org. # First, some generic CentOS images: @@ -526,12 +525,11 @@ mu2e/synergia:v0 egstern/wn-synergia2:latest # Mu3e -4ndr85/mu3e:v2 4ndr85/mu3e:v3 -paolobeltrame/mu3e:v5.1 paolobeltrame/mu3e:v5.4 paolobeltrame/mu3e:v5.42L paolobeltrame/mu3e:v5.4cosm2L +paolobeltrame/mu3e:mctrk #NEURON+Brian2+Python rtikid/python2-numpy-scipy-sympy-neuron-brian2-netpyne-inspyred-pyabf From ab63c13e2241d8bbb2d101eb990980c6027ce4fc Mon Sep 17 00:00:00 2001 From: Paolo Beltrame Date: Sun, 23 Feb 2025 16:48:39 +0000 Subject: [PATCH 102/162] Mu3e Sim for 2L and different beam rates --- docker_images.txt | 2 -- 1 file changed, 2 deletions(-) diff --git a/docker_images.txt b/docker_images.txt index 4dafc6d..2a1c6f1 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -527,8 +527,6 @@ egstern/wn-synergia2:latest # Mu3e 4ndr85/mu3e:v3 paolobeltrame/mu3e:v5.4 -paolobeltrame/mu3e:v5.42L -paolobeltrame/mu3e:v5.4cosm2L paolobeltrame/mu3e:mctrk #NEURON+Brian2+Python From 3079517764a24ad16d4b1139ab22866ddb993428 Mon Sep 17 00:00:00 2001 From: nihargupte-ph Date: Mon, 3 Mar 2025 16:57:31 +0100 Subject: [PATCH 103/162] added DINGO docker image --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index c3c0139..eec174a 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -501,6 +501,7 @@ containers.ligo.org/computing/distributed/igwn-pool-exorciser/gpu_burn:latest containers.ligo.org/colm.talbot/bilby-pipe-image-sandbox/bilby-pipe-production-python311:latest containers.ligo.org/colm.talbot/bilby-pipe-image-sandbox/gwpopulation-python311:latest containers.ligo.org/tomasz.baka/tgr-docker-image/bilby_tgr:latest +containers.ligo.org/nihar.gupte/dingo-ci/dingo:latest # LIGO/VIRGO/KAGRA containers containers.ligo.org/lscsoft/lalsuite/lalsuite-v6.59:el7 From fd9b2e1a24edc2fb558656c3790f9a9777ad50dc Mon Sep 17 00:00:00 2001 From: Matyas Selmeci Date: Tue, 4 Mar 2025 17:59:32 -0600 Subject: [PATCH 104/162] Replace matyasosg/testimage:v3 with matyasosg/testimage:v4 --- docker_images.txt | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docker_images.txt b/docker_images.txt index eec174a..1d6133e 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -177,7 +177,7 @@ k3jph/torch-diffeq:latest k3jph/python-optimization:latest leofang/cthyb-ohmic m8zeng/julia-packages -hub.opensciencegrid.org/matyasosg/testimage:v3 +hub.opensciencegrid.org/matyasosg/testimage:v4 mfrayer/perl-stats molssi/qcarchive_worker_openff:* nathanjmcl/gpaw-vdw-repository:latest From 42cfe8fac3a44d228cf989f8ad222cc20036326e Mon Sep 17 00:00:00 2001 From: Paolo Beltrame Date: Thu, 6 Mar 2025 14:57:42 +0000 Subject: [PATCH 105/162] mctrk with new beam rate --- docker_images.txt | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docker_images.txt b/docker_images.txt index 2a1c6f1..8dacd1f 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -525,7 +525,7 @@ mu2e/synergia:v0 egstern/wn-synergia2:latest # Mu3e -4ndr85/mu3e:v3 +# 4ndr85/mu3e:v3 (old) paolobeltrame/mu3e:v5.4 paolobeltrame/mu3e:mctrk From c4859ef7a1e58b2bb869619bd1cf4c8e6aeb7868 Mon Sep 17 00:00:00 2001 From: Wouter Deconinck Date: Mon, 17 Mar 2025 16:28:41 -0500 Subject: [PATCH 106/162] EIC: add nightly CUDA production and development images --- docker_images.txt | 2 ++ 1 file changed, 2 insertions(+) diff --git a/docker_images.txt b/docker_images.txt index af45e75..8d90be7 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -284,6 +284,8 @@ eicweb/jug_xl:*-stable eicweb/jug_xl:nightly eicweb/eic_xl:*-stable eicweb/eic_xl:nightly +eicweb/eic_cuda:nightly +eicweb/eic_dev_cuda:nightly raygunkennesaw/tensorflow:1.2.0-py3 # Common biology tools From 644713783396a8179f4809f4e0ad7f7d058a7b91 Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Wed, 19 Mar 2025 06:12:31 -0700 Subject: [PATCH 107/162] Removed old IGWN images --- docker_images.txt | 3 --- 1 file changed, 3 deletions(-) diff --git a/docker_images.txt b/docker_images.txt index 8d90be7..f13a379 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -294,9 +294,6 @@ raygunkennesaw/tensorflow:1.2.0-py3 cyverse/rsem-prepare # IGWN (Internation Gravitational Wave Network) worker nodes -igwn/lalsuite-dev:el7 -igwn/software:el7 -igwn/software:el7-testing igwn/software:stretch igwn/software:stretch-proposed From 80bd21a8f2922fe535b70873ab069b156962bde1 Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Wed, 19 Mar 2025 06:36:09 -0700 Subject: [PATCH 108/162] Removed old centos images --- docker_images.txt | 2 -- 1 file changed, 2 deletions(-) diff --git a/docker_images.txt b/docker_images.txt index f13a379..347fb0b 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -2,8 +2,6 @@ # First, some generic CentOS images: centos:latest -centos:centos6 -centos:centos7 # Fairly common Linux distros debian:latest From 8b3574935580e9638522bb4547cc21f102e42dd2 Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Wed, 19 Mar 2025 06:50:11 -0700 Subject: [PATCH 109/162] Cleaned up imaged removed upstream --- docker_images.txt | 7 ------- 1 file changed, 7 deletions(-) diff --git a/docker_images.txt b/docker_images.txt index 347fb0b..cad61ba 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -1,8 +1,5 @@ # This file is a list of Docker images to synchronize to singularity.opensciencegrid.org. -# First, some generic CentOS images: -centos:latest - # Fairly common Linux distros debian:latest debian:stable @@ -291,10 +288,6 @@ raygunkennesaw/tensorflow:1.2.0-py3 #biocontainers/blast cyverse/rsem-prepare -# IGWN (Internation Gravitational Wave Network) worker nodes -igwn/software:stretch -igwn/software:stretch-proposed - # LIGO PyCBC compute nodes pycbc/pycbc-el7:v1.16.12 pycbc/pycbc-el7:v1.18.3 From 3a2ae072d260c59584b137fde900f6807de69820 Mon Sep 17 00:00:00 2001 From: aaron-viets Date: Mon, 24 Mar 2025 13:27:11 -0500 Subject: [PATCH 110/162] Update docker_images.txt Requested container needed for running LIGO's calibration pipeline in high latency to produce calibrated strain data. --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index cad61ba..d305282 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -514,6 +514,7 @@ containers.ligo.org/snax/snax:v0.5.1 containers.ligo.org/snax/snax:v0.5.2 containers.ligo.org/lmxbcrosscorr/containers:crosscorr-lattice-dev-clean containers.ligo.org/echoes-model-independent/bayeswave-echoes-image:v1.0.7_echoes_reviewed +containers.ligo.org/calibration/gstlal-calibration:gstlal-calibration-1.5.10-v1 # Lancaster U, Muon g-2 Beamline Simulations valetov/beam_track:* From e305ccf8c42ebfe4f8d696cc5d6a42b7baed8303 Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Fri, 28 Mar 2025 13:00:51 -0700 Subject: [PATCH 111/162] Added pycbc/pycbc-el8:v2.8.* --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index d305282..dce0b9d 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -292,6 +292,7 @@ cyverse/rsem-prepare pycbc/pycbc-el7:v1.16.12 pycbc/pycbc-el7:v1.18.3 pycbc/pycbc-el8:v2.3.* +pycbc/pycbc-el8:v2.8.* pycbc/pycbc-el8:latest # CMS worker node From a7a280e58f0dae16d5b8fb6008e3a195af592984 Mon Sep 17 00:00:00 2001 From: Wouter Deconinck Date: Fri, 18 Apr 2025 11:24:18 -0500 Subject: [PATCH 112/162] fix: switch to ghcr.io for eic images; rm older jug_* images --- docker_images.txt | 10 ++++------ 1 file changed, 4 insertions(+), 6 deletions(-) diff --git a/docker_images.txt b/docker_images.txt index dce0b9d..50269e1 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -275,12 +275,10 @@ alpine whit2333/eic-slic:latest argonneeic/evochain:v* argonneeic/fpadsim:v* -eicweb/jug_xl:*-stable -eicweb/jug_xl:nightly -eicweb/eic_xl:*-stable -eicweb/eic_xl:nightly -eicweb/eic_cuda:nightly -eicweb/eic_dev_cuda:nightly +ghcr.io/eic/eic_xl:*-stable +ghcr.io/eic/eic_xl:nightly +ghcr.io/eic/eic_cuda:nightly +ghcr.io/eic/eic_dev_cuda:nightly raygunkennesaw/tensorflow:1.2.0-py3 # Common biology tools From 86e502ad7a5927bc898a67125cce74d4234e6027 Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Fri, 18 Apr 2025 09:50:52 -0700 Subject: [PATCH 113/162] Added containers.ligo.org/pystamp/pystampas:latest --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 50269e1..13a18f5 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -491,6 +491,7 @@ containers.ligo.org/colm.talbot/bilby-pipe-image-sandbox/bilby-pipe-production-p containers.ligo.org/colm.talbot/bilby-pipe-image-sandbox/gwpopulation-python311:latest containers.ligo.org/tomasz.baka/tgr-docker-image/bilby_tgr:latest containers.ligo.org/nihar.gupte/dingo-ci/dingo:latest +containers.ligo.org/pystamp/pystampas:latest # LIGO/VIRGO/KAGRA containers containers.ligo.org/lscsoft/lalsuite/lalsuite-v6.59:el7 From b0604b3f8eb7232bf93030fb12dd36e1baa5c13b Mon Sep 17 00:00:00 2001 From: Wouter Deconinck Date: Fri, 18 Apr 2025 13:17:33 -0500 Subject: [PATCH 114/162] fix: replace eic glob with explicit list --- docker_images.txt | 38 +++++++++++++++++++++++++++++++++++++- 1 file changed, 37 insertions(+), 1 deletion(-) diff --git a/docker_images.txt b/docker_images.txt index 13a18f5..5b8c4ce 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -275,7 +275,43 @@ alpine whit2333/eic-slic:latest argonneeic/evochain:v* argonneeic/fpadsim:v* -ghcr.io/eic/eic_xl:*-stable +# old dockerhub globbing for backwards compatibility during transition to ghcr.io +eicweb/eic_xl:*-stable +# globs fail on ghcr.io for now, so explicit listing +# ghcr.io/eic/eic_xl:*-stable +ghcr.io/eic/eic_xl:24.03.1-stable +ghcr.io/eic/eic_xl:24.03-stable +ghcr.io/eic/eic_xl:24.04.0-stable +ghcr.io/eic/eic_xl:24.04-stable +ghcr.io/eic/eic_xl:24.05.0-stable +ghcr.io/eic/eic_xl:24.05.2-stable +ghcr.io/eic/eic_xl:24.05-stable +ghcr.io/eic/eic_xl:24.06.0-stable +ghcr.io/eic/eic_xl:24.06-stable +ghcr.io/eic/eic_xl:24.07.0-stable +ghcr.io/eic/eic_xl:24.07-stable +ghcr.io/eic/eic_xl:24.08.0-stable +ghcr.io/eic/eic_xl:24.08.1-stable +ghcr.io/eic/eic_xl:24.08-stable +ghcr.io/eic/eic_xl:24.09.0-stable +ghcr.io/eic/eic_xl:24.09-stable +ghcr.io/eic/eic_xl:24.10.0-stable +ghcr.io/eic/eic_xl:24.10.1-stable +ghcr.io/eic/eic_xl:24.10-stable +ghcr.io/eic/eic_xl:24.11.0-stable +ghcr.io/eic/eic_xl:24.11.1-stable +ghcr.io/eic/eic_xl:24.11.2-stable +ghcr.io/eic/eic_xl:24.11-stable +ghcr.io/eic/eic_xl:24.12.0-stable +ghcr.io/eic/eic_xl:24.12-stable +ghcr.io/eic/eic_xl:25.01.0-stable +ghcr.io/eic/eic_xl:25.01.1-stable +ghcr.io/eic/eic_xl:25.01-stable +ghcr.io/eic/eic_xl:25.02.0-stable +ghcr.io/eic/eic_xl:25.02-stable +ghcr.io/eic/eic_xl:25.03.0-stable +ghcr.io/eic/eic_xl:25.03.1-stable +ghcr.io/eic/eic_xl:25.03-stable ghcr.io/eic/eic_xl:nightly ghcr.io/eic/eic_cuda:nightly ghcr.io/eic/eic_dev_cuda:nightly From 932a2f02d7dd20407253121b91b433b8037b5481 Mon Sep 17 00:00:00 2001 From: Wouter Deconinck Date: Fri, 18 Apr 2025 13:39:27 -0500 Subject: [PATCH 115/162] eic/eic_xl: add latest 25.04* Co-authored-by: Dmitry Kalinkin --- docker_images.txt | 2 ++ 1 file changed, 2 insertions(+) diff --git a/docker_images.txt b/docker_images.txt index 5b8c4ce..bf297f4 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -312,6 +312,8 @@ ghcr.io/eic/eic_xl:25.02-stable ghcr.io/eic/eic_xl:25.03.0-stable ghcr.io/eic/eic_xl:25.03.1-stable ghcr.io/eic/eic_xl:25.03-stable +ghcr.io/eic/eic_xl:25.04.0-stable +ghcr.io/eic/eic_xl:25.04-stable ghcr.io/eic/eic_xl:nightly ghcr.io/eic/eic_cuda:nightly ghcr.io/eic/eic_dev_cuda:nightly From 4eb06596dc83c29958c887a1b01aa1cdef7f8896 Mon Sep 17 00:00:00 2001 From: Wouter Deconinck Date: Fri, 18 Apr 2025 13:59:10 -0500 Subject: [PATCH 116/162] fix: explicitly list all docker eicweb/eic_xl:25.04* before glob --- docker_images.txt | 2 ++ 1 file changed, 2 insertions(+) diff --git a/docker_images.txt b/docker_images.txt index bf297f4..781e43c 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -276,6 +276,8 @@ whit2333/eic-slic:latest argonneeic/evochain:v* argonneeic/fpadsim:v* # old dockerhub globbing for backwards compatibility during transition to ghcr.io +eicweb/eic_xl:25.04.0-stable +eicweb/eic_xl:25.04-stable eicweb/eic_xl:*-stable # globs fail on ghcr.io for now, so explicit listing # ghcr.io/eic/eic_xl:*-stable From 7b03b99d6ea91e1c897b9b61f0f8c416606ae1a3 Mon Sep 17 00:00:00 2001 From: Wouter Deconinck Date: Sun, 20 Apr 2025 10:28:20 -0500 Subject: [PATCH 117/162] fix: for now keep nightly eic images on docker under eicweb as well --- docker_images.txt | 3 +++ 1 file changed, 3 insertions(+) diff --git a/docker_images.txt b/docker_images.txt index 781e43c..bf6c07a 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -276,6 +276,9 @@ whit2333/eic-slic:latest argonneeic/evochain:v* argonneeic/fpadsim:v* # old dockerhub globbing for backwards compatibility during transition to ghcr.io +eicweb/eic_xl:nightly +eicweb/eic_cuda:nightly +eicweb/eic_dev_cuda:nightly eicweb/eic_xl:25.04.0-stable eicweb/eic_xl:25.04-stable eicweb/eic_xl:*-stable From b2fdeebdd8eee934328d2538d54f31b96b518e91 Mon Sep 17 00:00:00 2001 From: Derek Weitzel Date: Tue, 22 Apr 2025 11:53:04 -0500 Subject: [PATCH 118/162] Add page_size to the api requests --- dockerhub.py | 1 + 1 file changed, 1 insertion(+) diff --git a/dockerhub.py b/dockerhub.py index 306a212..0f1e0d1 100644 --- a/dockerhub.py +++ b/dockerhub.py @@ -332,6 +332,7 @@ def _do_requests_get(self, address, **kwargs): kwargs['params'] = {} if 'perPage' not in kwargs['params'] and 'noPage' not in kwargs: kwargs['params']['perPage'] = 100 + kwargs['params']['page_size'] = 100 if 'noPage' in kwargs: del kwargs['noPage'] return self._do_request('GET', address, **kwargs) From 5aa8e11890c2c10000fcfef8452618384ea200e1 Mon Sep 17 00:00:00 2001 From: Dmitry Kalinkin Date: Wed, 23 Apr 2025 15:46:02 -0400 Subject: [PATCH 119/162] docker_images.txt: add eic_xl:25.04.1-stable --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index bf6c07a..83cee4e 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -318,6 +318,7 @@ ghcr.io/eic/eic_xl:25.03.0-stable ghcr.io/eic/eic_xl:25.03.1-stable ghcr.io/eic/eic_xl:25.03-stable ghcr.io/eic/eic_xl:25.04.0-stable +ghcr.io/eic/eic_xl:25.04.1-stable ghcr.io/eic/eic_xl:25.04-stable ghcr.io/eic/eic_xl:nightly ghcr.io/eic/eic_cuda:nightly From 09b0f4a685c0c130b549b9d1b9641fa181d131b2 Mon Sep 17 00:00:00 2001 From: Dmitry Kalinkin Date: Wed, 23 Apr 2025 15:49:43 -0400 Subject: [PATCH 120/162] add eicweb version too --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 83cee4e..c633415 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -280,6 +280,7 @@ eicweb/eic_xl:nightly eicweb/eic_cuda:nightly eicweb/eic_dev_cuda:nightly eicweb/eic_xl:25.04.0-stable +eicweb/eic_xl:25.04.1-stable eicweb/eic_xl:25.04-stable eicweb/eic_xl:*-stable # globs fail on ghcr.io for now, so explicit listing From ada96db7b06b96e2d0515a2d3a83826e451e615f Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Thu, 22 May 2025 07:38:43 -0700 Subject: [PATCH 121/162] Removed large e4s images --- docker_images.txt | 8 -------- 1 file changed, 8 deletions(-) diff --git a/docker_images.txt b/docker_images.txt index bf6c07a..5afef35 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -234,14 +234,6 @@ physino/mingle physino/heprapp physino/root:* -# E4S -ecpe4s/e4s-cuda:22.11 -ecpe4s/e4s-rocm:22.11 -ecpe4s/e4s-oneapi:22.11 -ecpe4s/e4s-cuda:23.05 -ecpe4s/e4s-rocm:23.05 -ecpe4s/e4s-oneapi:23.05 - # MINT project (rynge) ankushumn/rsatest mintproject/ankush:latest From 2c8a7c24aeffba7bc1fc5e600c3f3f73d4150501 Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Sat, 31 May 2025 09:46:34 -0700 Subject: [PATCH 122/162] Added paolobeltrame/mu3e:v5.5 --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 5afef35..0bbd13c 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -571,6 +571,7 @@ egstern/wn-synergia2:latest # 4ndr85/mu3e:v3 (old) paolobeltrame/mu3e:v5.4 paolobeltrame/mu3e:mctrk +paolobeltrame/mu3e:v5.5 #NEURON+Brian2+Python rtikid/python2-numpy-scipy-sympy-neuron-brian2-netpyne-inspyred-pyabf From 645aca3db3348800f689dad3854fbd2986d4fd94 Mon Sep 17 00:00:00 2001 From: Nicholas Cooley <39340402+npcooley@users.noreply.github.com> Date: Tue, 10 Jun 2025 10:24:01 -0400 Subject: [PATCH 123/162] Update docker_images.txt edit evolutionary scale model container identifiers --- docker_images.txt | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docker_images.txt b/docker_images.txt index d90f0b4..a266fac 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -181,7 +181,7 @@ nkern/21cmfast_env npanicker/r-desolve:* npavlovikj/prokevo:latest npcooley/heron:latest -npcooley/esmfold:* +npcooley/esm:0.0.3 npcooley/synextend:* docker.opencarp.org/opencarp/opencarp:latest parabola505/geospatxgboost:* From 01f480e8f0c62b311c6ae9c47816f14b805877b9 Mon Sep 17 00:00:00 2001 From: Nicholas Cooley <39340402+npcooley@users.noreply.github.com> Date: Sun, 22 Jun 2025 09:19:45 -0400 Subject: [PATCH 124/162] Update docker_images.txt expand EvolutionaryScaleModel container to include multiple versions --- docker_images.txt | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docker_images.txt b/docker_images.txt index 7c6cf8c..e8415bf 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -181,7 +181,7 @@ nkern/21cmfast_env npanicker/r-desolve:* npavlovikj/prokevo:latest npcooley/heron:latest -npcooley/esm:0.0.3 +npcooley/esm:* npcooley/synextend:* docker.opencarp.org/opencarp/opencarp:latest parabola505/geospatxgboost:* From 0120a00cb8522e140b11b69abea53a1f417d98b7 Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Wed, 25 Jun 2025 07:52:37 -0700 Subject: [PATCH 125/162] Added container paolobeltrame/mu3e:v6.0 --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index e8415bf..0316528 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -574,6 +574,7 @@ egstern/wn-synergia2:latest paolobeltrame/mu3e:v5.4 paolobeltrame/mu3e:mctrk paolobeltrame/mu3e:v5.5 +paolobeltrame/mu3e:v6.0 #NEURON+Brian2+Python rtikid/python2-numpy-scipy-sympy-neuron-brian2-netpyne-inspyred-pyabf From d446b16b1479fd8017ca3d1b0e96779c98c64716 Mon Sep 17 00:00:00 2001 From: Junjie Zhao Date: Wed, 9 Jul 2025 18:32:46 +0800 Subject: [PATCH 126/162] add tgr-ssb-docker for TGR-SSB analysis --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 0316528..ceeaa41 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -529,6 +529,7 @@ containers.ligo.org/colm.talbot/bilby-pipe-image-sandbox/gwpopulation-python311: containers.ligo.org/tomasz.baka/tgr-docker-image/bilby_tgr:latest containers.ligo.org/nihar.gupte/dingo-ci/dingo:latest containers.ligo.org/pystamp/pystampas:latest +containers.ligo.org/junjiezhao/tgr-ssb-docker-image/bilby_tgr:latest # LIGO/VIRGO/KAGRA containers containers.ligo.org/lscsoft/lalsuite/lalsuite-v6.59:el7 From f944ead6be31ff60d7b873602b5dcb5acd280d09 Mon Sep 17 00:00:00 2001 From: Stefan Piperov Date: Fri, 11 Jul 2025 08:05:20 -0400 Subject: [PATCH 127/162] Update docker_images.txt with Triton image Add fastml/triton-torchgeo:22.07-py3-geometric needed for SONIC --- docker_images.txt | 2 ++ 1 file changed, 2 insertions(+) diff --git a/docker_images.txt b/docker_images.txt index ceeaa41..b8bedfd 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -366,6 +366,8 @@ clelange/slc5-cms:latest # CMS L1 trigger analysis cmsl1tanalysis/cmsl1t-dev:* cmsl1tanalysis/cmsl1t:* +# CMS SONIC +fastml/triton-torchgeo:22.07-py3-geometric # ATLAS worker node lincolnbryant/atlas-wn From 260a2f52e42bec184dd064d99f685e795243ccec Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Tue, 29 Jul 2025 10:34:43 -0700 Subject: [PATCH 128/162] Changes from PR 509 --- docker_images.txt | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docker_images.txt b/docker_images.txt index b8bedfd..f062d42 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -575,9 +575,9 @@ egstern/wn-synergia2:latest # Mu3e # 4ndr85/mu3e:v3 (old) paolobeltrame/mu3e:v5.4 -paolobeltrame/mu3e:mctrk paolobeltrame/mu3e:v5.5 paolobeltrame/mu3e:v6.0 +paolobeltrame/mu3e:v6.2 #NEURON+Brian2+Python rtikid/python2-numpy-scipy-sympy-neuron-brian2-netpyne-inspyred-pyabf From 1f6561e6d68bfe10c51b9a2fddd23e6f375dfaa8 Mon Sep 17 00:00:00 2001 From: Paolo Beltrame <128703782+paolobeltrame3@users.noreply.github.com> Date: Fri, 1 Aug 2025 17:51:21 +0100 Subject: [PATCH 129/162] Update docker_images.txt --- docker_images.txt | 1 - 1 file changed, 1 deletion(-) diff --git a/docker_images.txt b/docker_images.txt index f062d42..34f9e58 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -574,7 +574,6 @@ egstern/wn-synergia2:latest # Mu3e # 4ndr85/mu3e:v3 (old) -paolobeltrame/mu3e:v5.4 paolobeltrame/mu3e:v5.5 paolobeltrame/mu3e:v6.0 paolobeltrame/mu3e:v6.2 From 35173560d7b6241700a84ebafcfbe7c7e048a035 Mon Sep 17 00:00:00 2001 From: Paolo Beltrame <128703782+paolobeltrame3@users.noreply.github.com> Date: Sat, 2 Aug 2025 12:30:57 +0100 Subject: [PATCH 130/162] Update docker_images.txt --- docker_images.txt | 1 - 1 file changed, 1 deletion(-) diff --git a/docker_images.txt b/docker_images.txt index 34f9e58..79596ab 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -575,7 +575,6 @@ egstern/wn-synergia2:latest # Mu3e # 4ndr85/mu3e:v3 (old) paolobeltrame/mu3e:v5.5 -paolobeltrame/mu3e:v6.0 paolobeltrame/mu3e:v6.2 #NEURON+Brian2+Python From 89e5e51b976fd970475800d0014cd09dd6b3b917 Mon Sep 17 00:00:00 2001 From: Paolo Beltrame <128703782+paolobeltrame3@users.noreply.github.com> Date: Tue, 5 Aug 2025 18:39:34 +0100 Subject: [PATCH 131/162] Including cosmic events version in docker_images.txt --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 79596ab..e96c11d 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -576,6 +576,7 @@ egstern/wn-synergia2:latest # 4ndr85/mu3e:v3 (old) paolobeltrame/mu3e:v5.5 paolobeltrame/mu3e:v6.2 +paolobeltrame/mu3e:v6.2cosm #NEURON+Brian2+Python rtikid/python2-numpy-scipy-sympy-neuron-brian2-netpyne-inspyred-pyabf From 8f74d06c8aa82517b9ceb102d5d08a4844d1f259 Mon Sep 17 00:00:00 2001 From: Karl Wette Date: Wed, 20 Aug 2025 15:47:30 +1000 Subject: [PATCH 132/162] docker_images.txt: add containers.ligo.org/karl-wette/lalsuite-containers:7.26.2.dev20250814 --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index e96c11d..91d7c40 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -501,6 +501,7 @@ containers.ligo.org/james-clark/research-projects-rit/rift:test containers.ligo.org/james-clark/research-projects-rit/rift:latest containers.ligo.org/james-clark/research-projects-rit/rift:production containers.ligo.org/james-clark/research-projects-rit/containers-rift_o4b_jl-chadhenshaw-teobresums_eccentric:latest +containers.ligo.org/karl-wette/lalsuite-containers:7.26.2.dev20250814 containers.ligo.org/rodrigo.tenorio/skyhough-post-processing:master containers.ligo.org/tessa.carver/pygrb_o3a:latest atanasi/matlab:v97 From 9424d1007af1f6a82e4e4f32eb97a70bb57d9db5 Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Fri, 19 Sep 2025 13:58:01 -0700 Subject: [PATCH 133/162] Added back E4S containers Added E4S images for oneAPI, CUDA, and CPU. --- docker_images.txt | 5 +++++ 1 file changed, 5 insertions(+) diff --git a/docker_images.txt b/docker_images.txt index 91d7c40..ee0c190 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -731,3 +731,8 @@ pegasus/montage-workflow-v3:latest # h2oai h2oai/h2o-open-source-k8s:latest + +# E4S - these can be large +ecpe4s/e4s-oneapi:25.06 +ecpe4s/e4s-cuda:25.06 +ecpe4s/e4s-cpu:25.06 From 49b10414835e6e2d4e318ac63a0115252830b464 Mon Sep 17 00:00:00 2001 From: Paolo Beltrame <128703782+paolobeltrame3@users.noreply.github.com> Date: Tue, 7 Oct 2025 18:13:17 +0200 Subject: [PATCH 134/162] Update docker_images.txt Adding v6.2 Mu3eSim with polarisation --- docker_images.txt | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docker_images.txt b/docker_images.txt index e96c11d..56b9d5b 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -573,10 +573,10 @@ mu2e/synergia:v0 egstern/wn-synergia2:latest # Mu3e -# 4ndr85/mu3e:v3 (old) paolobeltrame/mu3e:v5.5 paolobeltrame/mu3e:v6.2 paolobeltrame/mu3e:v6.2cosm +paolobeltrame/mu3e:v6.2pol #NEURON+Brian2+Python rtikid/python2-numpy-scipy-sympy-neuron-brian2-netpyne-inspyred-pyabf From c119ed2d28cbfe33c423f94e2c25b10cf72e9c64 Mon Sep 17 00:00:00 2001 From: Paolo Beltrame <128703782+paolobeltrame3@users.noreply.github.com> Date: Wed, 8 Oct 2025 14:47:36 +0200 Subject: [PATCH 135/162] Update docker_images.txt --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 619d21c..065c68e 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -578,6 +578,7 @@ paolobeltrame/mu3e:v5.5 paolobeltrame/mu3e:v6.2 paolobeltrame/mu3e:v6.2cosm paolobeltrame/mu3e:v6.2pol +paolobeltrame/mu3e:v6.2ph0pol #NEURON+Brian2+Python rtikid/python2-numpy-scipy-sympy-neuron-brian2-netpyne-inspyred-pyabf From 8899ca95246544b622c3a93cffd52d03e8d521f5 Mon Sep 17 00:00:00 2001 From: James Alexander Clark Date: Wed, 8 Oct 2025 11:49:10 -0400 Subject: [PATCH 136/162] Remove LIGO igwn-wave-compare image --- docker_images.txt | 1 - 1 file changed, 1 deletion(-) diff --git a/docker_images.txt b/docker_images.txt index 065c68e..44d5263 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -491,7 +491,6 @@ hub.opensciencegrid.org/htcondor/hpc-annex-pilot:el8 hub.opensciencegrid.org/htcondor/hpc-annex-pilot:latest # LIGO - user defined images -containers.ligo.org/bayeswave/igwn-wave-compare:latest containers.ligo.org/cody.messick/container:latest containers.ligo.org/joshua.willis/pycbc:latest containers.ligo.org/james-clark/bayeswave:latest From 40350a35d9fdd13c6dc709947626f64d6144f663 Mon Sep 17 00:00:00 2001 From: Paolo Beltrame <128703782+paolobeltrame3@users.noreply.github.com> Date: Sat, 11 Oct 2025 13:28:06 +0100 Subject: [PATCH 137/162] Update docker_images.txt with Polarisation --- docker_images.txt | 1 - 1 file changed, 1 deletion(-) diff --git a/docker_images.txt b/docker_images.txt index 44d5263..be63d1d 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -575,7 +575,6 @@ egstern/wn-synergia2:latest # Mu3e paolobeltrame/mu3e:v5.5 paolobeltrame/mu3e:v6.2 -paolobeltrame/mu3e:v6.2cosm paolobeltrame/mu3e:v6.2pol paolobeltrame/mu3e:v6.2ph0pol From b52f9ea651d6abc377a57973637618afcb2cda7d Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Thu, 23 Oct 2025 06:37:37 -0700 Subject: [PATCH 138/162] Added hub.opensciencegrid.org/htc/freesurfer:8.1.0 --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index be63d1d..b5d47a6 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -41,6 +41,7 @@ opensciencegrid/osg-wn:3.3-devel-el7 hub.opensciencegrid.org/htc/centos:7 hub.opensciencegrid.org/htc/debian:12 hub.opensciencegrid.org/htc/deeplabcut:3.0.0rc4 +hub.opensciencegrid.org/htc/freesurfer:8.1.0 hub.opensciencegrid.org/htc/gromacs:2023.4 hub.opensciencegrid.org/htc/gromacs:2024.2 hub.opensciencegrid.org/htc/matlab-runtime:R2023a From 31a9666e9b7e39a081ba00457060c5163b74f91a Mon Sep 17 00:00:00 2001 From: Karl Wette Date: Thu, 13 Nov 2025 12:41:19 +1100 Subject: [PATCH 139/162] Update lalsuite-containers:7.26.2.dev20250814 to build v2 --- docker_images.txt | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docker_images.txt b/docker_images.txt index b5d47a6..2da8d13 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -501,7 +501,7 @@ containers.ligo.org/james-clark/research-projects-rit/rift:test containers.ligo.org/james-clark/research-projects-rit/rift:latest containers.ligo.org/james-clark/research-projects-rit/rift:production containers.ligo.org/james-clark/research-projects-rit/containers-rift_o4b_jl-chadhenshaw-teobresums_eccentric:latest -containers.ligo.org/karl-wette/lalsuite-containers:7.26.2.dev20250814 +containers.ligo.org/karl-wette/lalsuite-containers:7.26.2.dev20250814-build2 containers.ligo.org/rodrigo.tenorio/skyhough-post-processing:master containers.ligo.org/tessa.carver/pygrb_o3a:latest atanasi/matlab:v97 From 114785dcfa9ee2ecc8045a61f40346a93c1577fd Mon Sep 17 00:00:00 2001 From: carriganm95 Date: Tue, 18 Nov 2025 15:00:48 -0600 Subject: [PATCH 140/162] Add carriganm95/uproot adding carriganm95/uproot:latest to docker_images.txt --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 2da8d13..2ef4aff 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -228,6 +228,7 @@ biocontainers/minimac4:v1.0.0-2-deb_cv1 nnesquivelr/decam_proc_base:* dxando/rift-container:latest mascencio/al9g4bnb:latest +carriganm95/uproot:latest # Geant4 simulation and analysis tools physino/gears From a00e0da9acbf491324c575aa5de62ce85c02351d Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Mon, 24 Nov 2025 09:26:36 -0800 Subject: [PATCH 141/162] Old versions of openjdk Removed deprecated Python and OpenJDK images. --- docker_images.txt | 4 ---- 1 file changed, 4 deletions(-) diff --git a/docker_images.txt b/docker_images.txt index 2ef4aff..30fb6f7 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -12,10 +12,6 @@ rockylinux:8 # Common programming environments python:latest python:3.4 -python:2.7 -openjdk:latest -openjdk:8 -openjdk:9 gcc:latest julia:latest r-base:latest From d2806a6d0a2cf284646053b434d04d868113cbe1 Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Mon, 24 Nov 2025 09:57:53 -0800 Subject: [PATCH 142/162] Removed image --- docker_images.txt | 1 - 1 file changed, 1 deletion(-) diff --git a/docker_images.txt b/docker_images.txt index 30fb6f7..421b1eb 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -34,7 +34,6 @@ opensciencegrid/osg-wn:3.3-testing-el7 opensciencegrid/osg-wn:3.3-devel-el7 # htc/ - this are the images replacing the osgvo-* ones -hub.opensciencegrid.org/htc/centos:7 hub.opensciencegrid.org/htc/debian:12 hub.opensciencegrid.org/htc/deeplabcut:3.0.0rc4 hub.opensciencegrid.org/htc/freesurfer:8.1.0 From 7fbea901868cd95a43cab912cf99ec2ddba77359 Mon Sep 17 00:00:00 2001 From: Dmitry Kalinkin Date: Tue, 25 Nov 2025 13:14:46 -0500 Subject: [PATCH 143/162] docker_images.txt: remove ghcr.io stable containers, add eic_ci --- docker_images.txt | 39 +-------------------------------------- 1 file changed, 1 insertion(+), 38 deletions(-) diff --git a/docker_images.txt b/docker_images.txt index 421b1eb..d90075e 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -272,44 +272,7 @@ eicweb/eic_xl:25.04.0-stable eicweb/eic_xl:25.04.1-stable eicweb/eic_xl:25.04-stable eicweb/eic_xl:*-stable -# globs fail on ghcr.io for now, so explicit listing -# ghcr.io/eic/eic_xl:*-stable -ghcr.io/eic/eic_xl:24.03.1-stable -ghcr.io/eic/eic_xl:24.03-stable -ghcr.io/eic/eic_xl:24.04.0-stable -ghcr.io/eic/eic_xl:24.04-stable -ghcr.io/eic/eic_xl:24.05.0-stable -ghcr.io/eic/eic_xl:24.05.2-stable -ghcr.io/eic/eic_xl:24.05-stable -ghcr.io/eic/eic_xl:24.06.0-stable -ghcr.io/eic/eic_xl:24.06-stable -ghcr.io/eic/eic_xl:24.07.0-stable -ghcr.io/eic/eic_xl:24.07-stable -ghcr.io/eic/eic_xl:24.08.0-stable -ghcr.io/eic/eic_xl:24.08.1-stable -ghcr.io/eic/eic_xl:24.08-stable -ghcr.io/eic/eic_xl:24.09.0-stable -ghcr.io/eic/eic_xl:24.09-stable -ghcr.io/eic/eic_xl:24.10.0-stable -ghcr.io/eic/eic_xl:24.10.1-stable -ghcr.io/eic/eic_xl:24.10-stable -ghcr.io/eic/eic_xl:24.11.0-stable -ghcr.io/eic/eic_xl:24.11.1-stable -ghcr.io/eic/eic_xl:24.11.2-stable -ghcr.io/eic/eic_xl:24.11-stable -ghcr.io/eic/eic_xl:24.12.0-stable -ghcr.io/eic/eic_xl:24.12-stable -ghcr.io/eic/eic_xl:25.01.0-stable -ghcr.io/eic/eic_xl:25.01.1-stable -ghcr.io/eic/eic_xl:25.01-stable -ghcr.io/eic/eic_xl:25.02.0-stable -ghcr.io/eic/eic_xl:25.02-stable -ghcr.io/eic/eic_xl:25.03.0-stable -ghcr.io/eic/eic_xl:25.03.1-stable -ghcr.io/eic/eic_xl:25.03-stable -ghcr.io/eic/eic_xl:25.04.0-stable -ghcr.io/eic/eic_xl:25.04.1-stable -ghcr.io/eic/eic_xl:25.04-stable +ghcr.io/eic/eic_ci:nightly ghcr.io/eic/eic_xl:nightly ghcr.io/eic/eic_cuda:nightly ghcr.io/eic/eic_dev_cuda:nightly From 8c0fc29cc311802adf50f558f773bfc84d10d593 Mon Sep 17 00:00:00 2001 From: Karl Wette Date: Wed, 10 Dec 2025 03:58:39 +1100 Subject: [PATCH 144/162] Add LALSuite images --- docker_images.txt | 2 ++ 1 file changed, 2 insertions(+) diff --git a/docker_images.txt b/docker_images.txt index d90075e..9800226 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -461,6 +461,8 @@ containers.ligo.org/james-clark/research-projects-rit/rift:latest containers.ligo.org/james-clark/research-projects-rit/rift:production containers.ligo.org/james-clark/research-projects-rit/containers-rift_o4b_jl-chadhenshaw-teobresums_eccentric:latest containers.ligo.org/karl-wette/lalsuite-containers:7.26.2.dev20250814-build2 +containers.ligo.org/karl-wette/lalsuite-containers:7.26.2.15fff1bf87f1bf6b283aadeb6f5a21df39350e4f.src-build1 +containers.ligo.org/karl-wette/lalsuite-containers:7.26.2.15fff1bf87f1bf6b283aadeb6f5a21df39350e4f.cuda-build1 containers.ligo.org/rodrigo.tenorio/skyhough-post-processing:master containers.ligo.org/tessa.carver/pygrb_o3a:latest atanasi/matlab:v97 From 2ac6006c2f3fa43bf92ab97bc1ef3264c96cf144 Mon Sep 17 00:00:00 2001 From: Karl Wette Date: Wed, 14 Jan 2026 21:40:27 +1300 Subject: [PATCH 145/162] Add LALSuite image --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 9800226..9478d3a 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -463,6 +463,7 @@ containers.ligo.org/james-clark/research-projects-rit/containers-rift_o4b_jl-cha containers.ligo.org/karl-wette/lalsuite-containers:7.26.2.dev20250814-build2 containers.ligo.org/karl-wette/lalsuite-containers:7.26.2.15fff1bf87f1bf6b283aadeb6f5a21df39350e4f.src-build1 containers.ligo.org/karl-wette/lalsuite-containers:7.26.2.15fff1bf87f1bf6b283aadeb6f5a21df39350e4f.cuda-build1 +containers.ligo.org/karl-wette/lalsuite-containers:7.26.2.e17f0a58054912da8a14a7f87505839783664e63.src-build1 containers.ligo.org/rodrigo.tenorio/skyhough-post-processing:master containers.ligo.org/tessa.carver/pygrb_o3a:latest atanasi/matlab:v97 From 7055c08bff6b1795015be0486524299f3ffdcf72 Mon Sep 17 00:00:00 2001 From: Wouter Deconinck Date: Mon, 19 Jan 2026 08:25:00 -0600 Subject: [PATCH 146/162] eic: add backwards compatibility test images --- docker_images.txt | 5 ++--- 1 file changed, 2 insertions(+), 3 deletions(-) diff --git a/docker_images.txt b/docker_images.txt index 9478d3a..adcafc4 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -268,12 +268,11 @@ argonneeic/fpadsim:v* eicweb/eic_xl:nightly eicweb/eic_cuda:nightly eicweb/eic_dev_cuda:nightly -eicweb/eic_xl:25.04.0-stable -eicweb/eic_xl:25.04.1-stable -eicweb/eic_xl:25.04-stable eicweb/eic_xl:*-stable ghcr.io/eic/eic_ci:nightly ghcr.io/eic/eic_xl:nightly +ghcr.io/eic/eic_xl:25.11.2-stable +ghcr.io/eic/eic_xl:25.07.0-stable ghcr.io/eic/eic_cuda:nightly ghcr.io/eic/eic_dev_cuda:nightly raygunkennesaw/tensorflow:1.2.0-py3 From 6d4985c77deff3c9e84108e806694349bc1de82a Mon Sep 17 00:00:00 2001 From: Harsh Narola Date: Wed, 11 Mar 2026 13:21:52 +0100 Subject: [PATCH 147/162] Add new Docker image for bilby_tgr --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index adcafc4..9f85f4e 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -491,6 +491,7 @@ containers.ligo.org/computing/distributed/igwn-pool-exorciser/gpu_burn:latest containers.ligo.org/colm.talbot/bilby-pipe-image-sandbox/bilby-pipe-production-python311:latest containers.ligo.org/colm.talbot/bilby-pipe-image-sandbox/gwpopulation-python311:latest containers.ligo.org/tomasz.baka/tgr-docker-image/bilby_tgr:latest +containers.ligo.org/narola.bharatbhai/tgr-docker-image/bilby_tgr:latest containers.ligo.org/nihar.gupte/dingo-ci/dingo:latest containers.ligo.org/pystamp/pystampas:latest containers.ligo.org/junjiezhao/tgr-ssb-docker-image/bilby_tgr:latest From 8185ca71ff38f7c1cfa44b3f0ac3a0536e44bac1 Mon Sep 17 00:00:00 2001 From: "mick.wright" Date: Mon, 16 Mar 2026 10:29:31 +0100 Subject: [PATCH 148/162] MAINT: Added Gravelamps container images to list --- docker_images.txt | 3 +++ 1 file changed, 3 insertions(+) diff --git a/docker_images.txt b/docker_images.txt index 9f85f4e..ab39aaa 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -495,6 +495,9 @@ containers.ligo.org/narola.bharatbhai/tgr-docker-image/bilby_tgr:latest containers.ligo.org/nihar.gupte/dingo-ci/dingo:latest containers.ligo.org/pystamp/pystampas:latest containers.ligo.org/junjiezhao/tgr-ssb-docker-image/bilby_tgr:latest +containers.ligo.org/link/pre-merger-software/gravelamps:python-3.10 +containers.ligo.org/link/pre-merger-software/gravelamps:python-3.11 +containers.ligo.org/link/pre-merger-software/gravelamps:python-3.12 # LIGO/VIRGO/KAGRA containers containers.ligo.org/lscsoft/lalsuite/lalsuite-v6.59:el7 From fcf8533f12d6e5fc97d71a600d87c88369eef8cf Mon Sep 17 00:00:00 2001 From: jefheynen Date: Wed, 18 Mar 2026 11:20:09 +0100 Subject: [PATCH 149/162] add golum_pipe image to list --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index ab39aaa..d2cc6c4 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -498,6 +498,7 @@ containers.ligo.org/junjiezhao/tgr-ssb-docker-image/bilby_tgr:latest containers.ligo.org/link/pre-merger-software/gravelamps:python-3.10 containers.ligo.org/link/pre-merger-software/gravelamps:python-3.11 containers.ligo.org/link/pre-merger-software/gravelamps:python-3.12 +containers.ligo.org/link/pre-merger-software/golum_pipe:python-3.10 # LIGO/VIRGO/KAGRA containers containers.ligo.org/lscsoft/lalsuite/lalsuite-v6.59:el7 From a589a9f7e0f790a5e3661cf4889897903bcf44f8 Mon Sep 17 00:00:00 2001 From: hzhu16 Date: Thu, 19 Mar 2026 16:38:45 -0500 Subject: [PATCH 150/162] Moved eic nightly images to the bottom --- docker_images.txt | 34 +++++++++++++++++----------------- 1 file changed, 17 insertions(+), 17 deletions(-) diff --git a/docker_images.txt b/docker_images.txt index d2cc6c4..869097b 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -260,23 +260,6 @@ xenonnt/osg_dev:* busybox alpine -# Electron Ion Collider images -whit2333/eic-slic:latest -argonneeic/evochain:v* -argonneeic/fpadsim:v* -# old dockerhub globbing for backwards compatibility during transition to ghcr.io -eicweb/eic_xl:nightly -eicweb/eic_cuda:nightly -eicweb/eic_dev_cuda:nightly -eicweb/eic_xl:*-stable -ghcr.io/eic/eic_ci:nightly -ghcr.io/eic/eic_xl:nightly -ghcr.io/eic/eic_xl:25.11.2-stable -ghcr.io/eic/eic_xl:25.07.0-stable -ghcr.io/eic/eic_cuda:nightly -ghcr.io/eic/eic_dev_cuda:nightly -raygunkennesaw/tensorflow:1.2.0-py3 - # Common biology tools # Biocontainers :latest doesn't exist any longer. #biocontainers/blast @@ -702,3 +685,20 @@ h2oai/h2o-open-source-k8s:latest ecpe4s/e4s-oneapi:25.06 ecpe4s/e4s-cuda:25.06 ecpe4s/e4s-cpu:25.06 + +# Electron Ion Collider images +whit2333/eic-slic:latest +argonneeic/evochain:v* +argonneeic/fpadsim:v* +# old dockerhub globbing for backwards compatibility during transition to ghcr.io +eicweb/eic_xl:nightly +eicweb/eic_cuda:nightly +eicweb/eic_dev_cuda:nightly +eicweb/eic_xl:*-stable +ghcr.io/eic/eic_ci:nightly +ghcr.io/eic/eic_xl:nightly +ghcr.io/eic/eic_xl:25.11.2-stable +ghcr.io/eic/eic_xl:25.07.0-stable +ghcr.io/eic/eic_cuda:nightly +ghcr.io/eic/eic_dev_cuda:nightly +raygunkennesaw/tensorflow:1.2.0-py3 From c9c5d6a010379df2dc5afdbcdf5321ced0f16eb7 Mon Sep 17 00:00:00 2001 From: Colm Talbot Date: Tue, 31 Mar 2026 17:22:52 -0400 Subject: [PATCH 151/162] Add bayeswave version 1.1.2 to docker images list --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 869097b..ee7eadd 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -493,6 +493,7 @@ containers.ligo.org/lscsoft/lalsuite/lalsuite-v6.62:stretch containers.ligo.org/lscsoft/bayeswave:latest containers.ligo.org/lscsoft/bayeswave:v1.0.6 containers.ligo.org/lscsoft/bayeswave:v1.0.7 +containers.ligo.org/lscsoft/bayeswave:v1.1.2 containers.ligo.org/computing/rucio/containers/rucio-clients:latest containers.ligo.org/lscsoft/gstlal:master containers.ligo.org/lscsoft/gstlal:osg-dev From 463033ee713a57c42e4fe57d1d7fbe4308adff18 Mon Sep 17 00:00:00 2001 From: Eremey Valetov Date: Fri, 3 Apr 2026 03:28:43 -0400 Subject: [PATCH 152/162] Add valetov/cosy-glyfada image --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index ee7eadd..7b6c447 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -512,6 +512,7 @@ valetov/beam_track:* # Michigan State U, Center for Beam Theory and Dynamical Systems valetov/cosy:* +valetov/cosy-glyfada:* valetov/g4bl:* valetov/gm2dev:* valetov/glyfada:* From 6c602c41ba530ee42ad99376ac9c71ae8ce23fbd Mon Sep 17 00:00:00 2001 From: Tito Dal Canton Date: Thu, 16 Apr 2026 11:34:15 +0200 Subject: [PATCH 153/162] Add PyCBC 2.11.* images --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 7b6c447..e9a3a5c 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -270,6 +270,7 @@ pycbc/pycbc-el7:v1.16.12 pycbc/pycbc-el7:v1.18.3 pycbc/pycbc-el8:v2.3.* pycbc/pycbc-el8:v2.8.* +pycbc/pycbc-el8:v2.11.* pycbc/pycbc-el8:latest # CMS worker node From 8e1af53c231552f6765561587c9fc57210bc970c Mon Sep 17 00:00:00 2001 From: Maria-Antonia Ferrer Date: Thu, 23 Apr 2026 00:57:36 -0700 Subject: [PATCH 154/162] Add bilby-pyfstat container image for CVMFS publishing --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index 7b6c447..d174a17 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -482,6 +482,7 @@ containers.ligo.org/link/pre-merger-software/gravelamps:python-3.10 containers.ligo.org/link/pre-merger-software/gravelamps:python-3.11 containers.ligo.org/link/pre-merger-software/gravelamps:python-3.12 containers.ligo.org/link/pre-merger-software/golum_pipe:python-3.10 +containers.ligo.org/maria-antonia.ferrer/bilby-pyfstat-container:69998c5f185b9d66c0f2df2366f4fc4788d9ac36 # LIGO/VIRGO/KAGRA containers containers.ligo.org/lscsoft/lalsuite/lalsuite-v6.59:el7 From f626ba757d807d0ae3a509f44fcb974f24c6c7f2 Mon Sep 17 00:00:00 2001 From: Arnav Menon Date: Sun, 26 Apr 2026 21:40:14 -0400 Subject: [PATCH 155/162] Add Docker image for Emory Proton Therapy Center Added a new Docker image for Emory Proton Therapy Center. --- docker_images.txt | 3 +++ 1 file changed, 3 insertions(+) diff --git a/docker_images.txt b/docker_images.txt index 7b6c447..12f4e07 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -704,3 +704,6 @@ ghcr.io/eic/eic_xl:25.07.0-stable ghcr.io/eic/eic_cuda:nightly ghcr.io/eic/eic_dev_cuda:nightly raygunkennesaw/tensorflow:1.2.0-py3 + +# Emory Proton Therapy Center +docker.io/amenon83/my-topas:v1 From d8cb4963fc0ffe386e447a4c53fbaec2273ec322 Mon Sep 17 00:00:00 2001 From: Michael Kossin Date: Thu, 30 Apr 2026 09:14:24 -0700 Subject: [PATCH 156/162] Add jeffersonlab/japan-moller:nightly Adds the JAPAN-MOLLER analyzer container image (https://hub.docker.com/r/jeffersonlab/japan-moller) so it is synced to /cvmfs/singularity.opensciencegrid.org/ for OSG users. --- docker_images.txt | 4 ++++ 1 file changed, 4 insertions(+) diff --git a/docker_images.txt b/docker_images.txt index b2c8e2c..5a36fbe 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -635,6 +635,10 @@ jasonkwan/autometa:latest # UW-Madison & Reed College -- Gitter Lab, SPRAS project # https://hub.docker.com/r/reedcompbio reedcompbio/omics-integrator-1:latest + +# JLab Parity Simulations and Analysis - JAPAN-MOLLER +# https://hub.docker.com/r/jeffersonlab/japan-moller +jeffersonlab/japan-moller:nightly reedcompbio/omics-integrator-1:no-conda reedcompbio/omics-integrator-2:v2 reedcompbio/pathlinker:latest From c1b8cbaa5304f1f81a706335b33ee607c26478ac Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Thu, 7 May 2026 12:25:04 -0700 Subject: [PATCH 157/162] Fix image reference for my-topas Updated the image reference for my-topas. --- docker_images.txt | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docker_images.txt b/docker_images.txt index a528f97..0aa020c 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -712,4 +712,4 @@ ghcr.io/eic/eic_dev_cuda:nightly raygunkennesaw/tensorflow:1.2.0-py3 # Emory Proton Therapy Center -docker.io/amenon83/my-topas:v1 +amenon83/my-topas:v1 From fdeb35a77a1f65248ad33216b4b6ee2fdf6f0b13 Mon Sep 17 00:00:00 2001 From: Mats Rynge Date: Thu, 7 May 2026 13:14:13 -0700 Subject: [PATCH 158/162] Remove deprecated LIGO/VIRGO/KAGRA container tags Removed outdated LIGO/VIRGO/KAGRA container versions. --- docker_images.txt | 6 ------ 1 file changed, 6 deletions(-) diff --git a/docker_images.txt b/docker_images.txt index 0aa020c..f6a0553 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -486,12 +486,6 @@ containers.ligo.org/link/pre-merger-software/golum_pipe:python-3.10 containers.ligo.org/maria-antonia.ferrer/bilby-pyfstat-container:69998c5f185b9d66c0f2df2366f4fc4788d9ac36 # LIGO/VIRGO/KAGRA containers -containers.ligo.org/lscsoft/lalsuite/lalsuite-v6.59:el7 -containers.ligo.org/lscsoft/lalsuite/lalsuite-v6.59:stretch -containers.ligo.org/lscsoft/lalsuite/lalsuite-v6.60:el7 -containers.ligo.org/lscsoft/lalsuite/lalsuite-v6.60:stretch -containers.ligo.org/lscsoft/lalsuite/lalsuite-v6.62:el7 -containers.ligo.org/lscsoft/lalsuite/lalsuite-v6.62:stretch containers.ligo.org/lscsoft/bayeswave:latest containers.ligo.org/lscsoft/bayeswave:v1.0.6 containers.ligo.org/lscsoft/bayeswave:v1.0.7 From 64542de4fdee52289b0f4e0505e09e8f0b865aa3 Mon Sep 17 00:00:00 2001 From: Alicia Calafat Date: Tue, 12 May 2026 08:18:50 -0700 Subject: [PATCH 159/162] Add paper1-population lensing-v1 image --- docker_images.txt | 1 + 1 file changed, 1 insertion(+) diff --git a/docker_images.txt b/docker_images.txt index f6a0553..1133bc6 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -484,6 +484,7 @@ containers.ligo.org/link/pre-merger-software/gravelamps:python-3.11 containers.ligo.org/link/pre-merger-software/gravelamps:python-3.12 containers.ligo.org/link/pre-merger-software/golum_pipe:python-3.10 containers.ligo.org/maria-antonia.ferrer/bilby-pyfstat-container:69998c5f185b9d66c0f2df2366f4fc4788d9ac36 +containers.ligo.org/adityakumar.sharma/directed-search-lensed-cw/paper1-population:lensing-v1 # LIGO/VIRGO/KAGRA containers containers.ligo.org/lscsoft/bayeswave:latest From cb5062a1d33fb69782e2c9a318ffac6020739c6e Mon Sep 17 00:00:00 2001 From: Karl Wette Date: Sun, 26 Apr 2026 21:53:54 +1000 Subject: [PATCH 160/162] Reorganise LIGO/VIRGO/KAGRA images under finer-grained headings --- docker_images.txt | 126 ++++++++++++++++++++++++++-------------------- 1 file changed, 71 insertions(+), 55 deletions(-) diff --git a/docker_images.txt b/docker_images.txt index f6a0553..7a45a17 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -433,75 +433,91 @@ htcondor/htmap-exec:* hub.opensciencegrid.org/htcondor/hpc-annex-pilot:el8 hub.opensciencegrid.org/htcondor/hpc-annex-pilot:latest -# LIGO - user defined images -containers.ligo.org/cody.messick/container:latest -containers.ligo.org/joshua.willis/pycbc:latest -containers.ligo.org/james-clark/bayeswave:latest -containers.ligo.org/james-clark/bayeswave:test -containers.ligo.org/james-clark/bilby_pipe_public:latest -containers.ligo.org/james-clark/research-projects-rit/rift:test -containers.ligo.org/james-clark/research-projects-rit/rift:latest -containers.ligo.org/james-clark/research-projects-rit/rift:production -containers.ligo.org/james-clark/research-projects-rit/containers-rift_o4b_jl-chadhenshaw-teobresums_eccentric:latest -containers.ligo.org/karl-wette/lalsuite-containers:7.26.2.dev20250814-build2 -containers.ligo.org/karl-wette/lalsuite-containers:7.26.2.15fff1bf87f1bf6b283aadeb6f5a21df39350e4f.src-build1 -containers.ligo.org/karl-wette/lalsuite-containers:7.26.2.15fff1bf87f1bf6b283aadeb6f5a21df39350e4f.cuda-build1 -containers.ligo.org/karl-wette/lalsuite-containers:7.26.2.e17f0a58054912da8a14a7f87505839783664e63.src-build1 -containers.ligo.org/rodrigo.tenorio/skyhough-post-processing:master -containers.ligo.org/tessa.carver/pygrb_o3a:latest -atanasi/matlab:v97 -atanasi/darkmatter:latest -lucarvirgo/tensorflowmatlab:latest -containers.ligo.org/james-clark/tgr_images/testing_gr_fta:latest -containers.ligo.org/james-clark/tgr_images/lalsuite-master:latest -containers.ligo.org/cwinpy/cwinpy-containers/cwinpy-dev-python38:latest -containers.ligo.org/rhys.poulton/cw-frequencyhough-image:latest -containers.ligo.org/rhys.poulton/cw-frequencyhough-image:escape-datalake -containers.ligo.org/aei-tgr/cvmfs-images/pseob:rd-latest +# LIGO/VIRGO/KAGRA - Software - BayesWave +containers.ligo.org/lscsoft/bayeswave:latest +containers.ligo.org/lscsoft/bayeswave:v1.0.6 +containers.ligo.org/lscsoft/bayeswave:v1.0.7 +containers.ligo.org/lscsoft/bayeswave:v1.1.2 + +# LIGO/VIRGO/KAGRA - Software - GstLAL +containers.ligo.org/lscsoft/gstlal:master +containers.ligo.org/lscsoft/gstlal:osg-dev +containers.ligo.org/gstlal/o4a-containers:cvmfs1 +containers.ligo.org/gstlal/o4a-containers:cvmfs2 +containers.ligo.org/gstlal/o4b-containers:cvmfs1 +containers.ligo.org/gstlal/o4b-containers:cvmfs2 +containers.ligo.org/calibration/gstlal-calibration:gstlal-calibration-1.5.10-v1 + +# LIGO/VIRGO/KAGRA - Software - SNAX +containers.ligo.org/snax/snax:v0.5.1 +containers.ligo.org/snax/snax:v0.5.2 + +# LIGO/VIRGO/KAGRA - Software - pSEOB TGR +containers.ligo.org/aei-tgr/cvmfs-images/pseob:envs containers.ligo.org/aei-tgr/cvmfs-images/pseob:fti-latest +containers.ligo.org/aei-tgr/cvmfs-images/pseob:rd-latest containers.ligo.org/aei-tgr/cvmfs-images/pseob:testing -containers.ligo.org/aei-tgr/cvmfs-images/pseob:envs containers.ligo.org/aei-tgr/cvmfs-images/seob-rom:latest containers.ligo.org/aei-tgr/cvmfs-images/seob-rom:v5 -containers.ligo.org/alan.knee/lal-images/lalsuite-fstatbinary:latest -ghcr.io/ml4gw/hermes/tritonserver:22.12 -ghcr.io/ml4gw/hermes/tritonserver:22.07 + +# LIGO/VIRGO/KAGRA - Software - Computing tools +containers.ligo.org/computing/rucio/containers/rucio-clients:latest +containers.ligo.org/computing/distributed/igwn-pool-exorciser/gpu_burn:latest + +# LIGO/VIRGO/KAGRA - Software - CWInPy +containers.ligo.org/cwinpy/cwinpy-containers/cwinpy-dev-python38:latest + +# LIGO/VIRGO/KAGRA - Software - PySTAMPAS +containers.ligo.org/pystamp/pystampas:latest + +# LIGO/VIRGO/KAGRA - Software - ML4GW ghcr.io/ml4gw/hermes/tritonserver:22.02 +ghcr.io/ml4gw/hermes/tritonserver:22.07 +ghcr.io/ml4gw/hermes/tritonserver:22.12 ghcr.io/ml4gw/hermes/tritonserver:23.01 ghcr.io/ml4gw/hermes/tritonserver:24.01 ghcr.io/ml4gw/pinto:main -containers.ligo.org/yannick.lecoeuche/glitch-pe-container/glitch-pe:latest -containers.ligo.org/computing/distributed/igwn-pool-exorciser/gpu_burn:latest -containers.ligo.org/colm.talbot/bilby-pipe-image-sandbox/bilby-pipe-production-python311:latest -containers.ligo.org/colm.talbot/bilby-pipe-image-sandbox/gwpopulation-python311:latest -containers.ligo.org/tomasz.baka/tgr-docker-image/bilby_tgr:latest -containers.ligo.org/narola.bharatbhai/tgr-docker-image/bilby_tgr:latest -containers.ligo.org/nihar.gupte/dingo-ci/dingo:latest -containers.ligo.org/pystamp/pystampas:latest -containers.ligo.org/junjiezhao/tgr-ssb-docker-image/bilby_tgr:latest + +# LIGO/VIRGO/KAGRA - Software - Gravelamps, GOLUM containers.ligo.org/link/pre-merger-software/gravelamps:python-3.10 containers.ligo.org/link/pre-merger-software/gravelamps:python-3.11 containers.ligo.org/link/pre-merger-software/gravelamps:python-3.12 containers.ligo.org/link/pre-merger-software/golum_pipe:python-3.10 -containers.ligo.org/maria-antonia.ferrer/bilby-pyfstat-container:69998c5f185b9d66c0f2df2366f4fc4788d9ac36 -# LIGO/VIRGO/KAGRA containers -containers.ligo.org/lscsoft/bayeswave:latest -containers.ligo.org/lscsoft/bayeswave:v1.0.6 -containers.ligo.org/lscsoft/bayeswave:v1.0.7 -containers.ligo.org/lscsoft/bayeswave:v1.1.2 -containers.ligo.org/computing/rucio/containers/rucio-clients:latest -containers.ligo.org/lscsoft/gstlal:master -containers.ligo.org/lscsoft/gstlal:osg-dev -containers.ligo.org/gstlal/o4a-containers:cvmfs1 -containers.ligo.org/gstlal/o4a-containers:cvmfs2 -containers.ligo.org/gstlal/o4b-containers:cvmfs1 -containers.ligo.org/gstlal/o4b-containers:cvmfs2 -containers.ligo.org/snax/snax:v0.5.1 -containers.ligo.org/snax/snax:v0.5.2 -containers.ligo.org/lmxbcrosscorr/containers:crosscorr-lattice-dev-clean +# LIGO/VIRGO/KAGRA - User defined images +atanasi/darkmatter:latest +atanasi/matlab:v97 +containers.ligo.org/alan.knee/lal-images/lalsuite-fstatbinary:latest +containers.ligo.org/cody.messick/container:latest +containers.ligo.org/colm.talbot/bilby-pipe-image-sandbox/bilby-pipe-production-python311:latest +containers.ligo.org/colm.talbot/bilby-pipe-image-sandbox/gwpopulation-python311:latest containers.ligo.org/echoes-model-independent/bayeswave-echoes-image:v1.0.7_echoes_reviewed -containers.ligo.org/calibration/gstlal-calibration:gstlal-calibration-1.5.10-v1 +containers.ligo.org/james-clark/bayeswave:latest +containers.ligo.org/james-clark/bayeswave:test +containers.ligo.org/james-clark/bilby_pipe_public:latest +containers.ligo.org/james-clark/research-projects-rit/containers-rift_o4b_jl-chadhenshaw-teobresums_eccentric:latest +containers.ligo.org/james-clark/research-projects-rit/rift:latest +containers.ligo.org/james-clark/research-projects-rit/rift:production +containers.ligo.org/james-clark/research-projects-rit/rift:test +containers.ligo.org/james-clark/tgr_images/lalsuite-master:latest +containers.ligo.org/james-clark/tgr_images/testing_gr_fta:latest +containers.ligo.org/joshua.willis/pycbc:latest +containers.ligo.org/junjiezhao/tgr-ssb-docker-image/bilby_tgr:latest +containers.ligo.org/karl-wette/lalsuite-containers:7.26.2.15fff1bf87f1bf6b283aadeb6f5a21df39350e4f.cuda-build1 +containers.ligo.org/karl-wette/lalsuite-containers:7.26.2.15fff1bf87f1bf6b283aadeb6f5a21df39350e4f.src-build1 +containers.ligo.org/karl-wette/lalsuite-containers:7.26.2.dev20250814-build2 +containers.ligo.org/karl-wette/lalsuite-containers:7.26.2.e17f0a58054912da8a14a7f87505839783664e63.src-build1 +containers.ligo.org/lmxbcrosscorr/containers:crosscorr-lattice-dev-clean +containers.ligo.org/maria-antonia.ferrer/bilby-pyfstat-container:69998c5f185b9d66c0f2df2366f4fc4788d9ac36 +containers.ligo.org/narola.bharatbhai/tgr-docker-image/bilby_tgr:latest +containers.ligo.org/nihar.gupte/dingo-ci/dingo:latest +containers.ligo.org/rhys.poulton/cw-frequencyhough-image:escape-datalake +containers.ligo.org/rhys.poulton/cw-frequencyhough-image:latest +containers.ligo.org/rodrigo.tenorio/skyhough-post-processing:master +containers.ligo.org/tessa.carver/pygrb_o3a:latest +containers.ligo.org/tomasz.baka/tgr-docker-image/bilby_tgr:latest +containers.ligo.org/yannick.lecoeuche/glitch-pe-container/glitch-pe:latest +lucarvirgo/tensorflowmatlab:latest # Lancaster U, Muon g-2 Beamline Simulations valetov/beam_track:* From 09e46030a153c32b70060fc42d774266cac31f47 Mon Sep 17 00:00:00 2001 From: Karl Wette Date: Wed, 13 May 2026 15:27:43 +1000 Subject: [PATCH 161/162] Add updated LALSuite images --- docker_images.txt | 4 ++++ 1 file changed, 4 insertions(+) diff --git a/docker_images.txt b/docker_images.txt index 7a45a17..e9fa16e 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -433,6 +433,10 @@ htcondor/htmap-exec:* hub.opensciencegrid.org/htcondor/hpc-annex-pilot:el8 hub.opensciencegrid.org/htcondor/hpc-annex-pilot:latest +# LIGO/VIRGO/KAGRA - Software - LALSuite +containers.ligo.org/lscsoft/lalsuite/debian:7.26 +containers.ligo.org/lscsoft/lalsuite/el:7.26 + # LIGO/VIRGO/KAGRA - Software - BayesWave containers.ligo.org/lscsoft/bayeswave:latest containers.ligo.org/lscsoft/bayeswave:v1.0.6 From 5133758014b84068684031d73e0f4708985dc995 Mon Sep 17 00:00:00 2001 From: Alicia Calafat Date: Wed, 13 May 2026 03:37:22 -0700 Subject: [PATCH 162/162] Use public cw-lensing-population image --- docker_images.txt | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docker_images.txt b/docker_images.txt index 1133bc6..3f0e5f7 100644 --- a/docker_images.txt +++ b/docker_images.txt @@ -484,7 +484,7 @@ containers.ligo.org/link/pre-merger-software/gravelamps:python-3.11 containers.ligo.org/link/pre-merger-software/gravelamps:python-3.12 containers.ligo.org/link/pre-merger-software/golum_pipe:python-3.10 containers.ligo.org/maria-antonia.ferrer/bilby-pyfstat-container:69998c5f185b9d66c0f2df2366f4fc4788d9ac36 -containers.ligo.org/adityakumar.sharma/directed-search-lensed-cw/paper1-population:lensing-v1 +containers.ligo.org/alicia.calafat/cw-lensing-population:lensing-v1 # LIGO/VIRGO/KAGRA containers containers.ligo.org/lscsoft/bayeswave:latest