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Issue in MDSplus models generation (IMAS-Core>=5.6) #146
Description
Commit a14b8b6 (#98) tries to get compatibility with IMAS-Core>=5.6 (using the new MDSPLUS_MODELS_PATH variable), this works well when using existing models, but breaks generation of models. The external Java process jTraverser (plain MDSplus) only finds where to create tree ids through ids_path variable (constructed by definition as treename_path).
--- Logging error ---
Traceback (most recent call last):
File "/work/imas/opt/EasyBuild/software/IMAS-Python/2.3.0-intel-2025b/lib/python3.13/site-packages/imas/backends/imas_core/mdsplus_model.py", line 327, in create_mdsplus_model
check_output(
~~~~~~~~~~~~^
[
^
...<14 lines>...
},
^^
)
^
File "/work/imas/opt/EasyBuild/software/Python/3.13.5-GCCcore-14.3.0/lib/python3.13/subprocess.py", line 472, in check_output
return run(*popenargs, stdout=PIPE, timeout=timeout, check=True,
~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
**kwargs).stdout
^^^^^^^^^
File "/work/imas/opt/EasyBuild/software/Python/3.13.5-GCCcore-14.3.0/lib/python3.13/subprocess.py", line 577, in run
raise CalledProcessError(retcode, process.args,
output=stdout, stderr=stderr)
subprocess.CalledProcessError: Command '['java', '-Xms1g', '-Xmx8g', '-XX:+UseG1GC', '-cp', '/work/imas/opt/EasyBuild/software/MDSplus/7.153.3-GCCcore-14.3.0/java/classes/jTraverser.jar', 'mds.jtraverser.CompileTree', 'ids']' returned non-zero exit status 1.
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/work/imas/opt/EasyBuild/software/Python/3.13.5-GCCcore-14.3.0/lib/python3.13/logging/__init__.py", line 1151, in emit
msg = self.format(record)
File "/work/imas/opt/EasyBuild/software/Python/3.13.5-GCCcore-14.3.0/lib/python3.13/logging/__init__.py", line 999, in format
return fmt.format(record)
~~~~~~~~~~^^^^^^^^
File "/work/imas/opt/EasyBuild/software/IMAS-Python/2.3.0-intel-2025b/lib/python3.13/site-packages/imas/setup_logging.py", line 35, in format
return formatter.format(record)
~~~~~~~~~~~~~~~~^^^^^^^^
File "/work/imas/opt/EasyBuild/software/Python/3.13.5-GCCcore-14.3.0/lib/python3.13/logging/__init__.py", line 712, in format
record.message = record.getMessage()
~~~~~~~~~~~~~~~~~^^
File "/work/imas/opt/EasyBuild/software/Python/3.13.5-GCCcore-14.3.0/lib/python3.13/logging/__init__.py", line 400, in getMessage
msg = msg % self.args
~~~~^~~~~~~~~~~
TypeError: not all arguments converted during string formatting
Call stack:
File "/home/ITER/hoeneno/GIT/IMAS-Python/../mds_test.py", line 3, in <module>
db = imas.DBEntry("imas:mdsplus?path=./testmds","w",dd_version="3.42.2")
File "/work/imas/opt/EasyBuild/software/IMAS-Python/2.3.0-intel-2025b/lib/python3.13/site-packages/imas/db_entry.py", line 192, in __init__
self._dbe_impl = cls.from_uri(self.uri, mode, self._ids_factory)
File "/work/imas/opt/EasyBuild/software/IMAS-Python/2.3.0-intel-2025b/lib/python3.13/site-packages/imas/backends/imas_core/db_entry_al.py", line 84, in from_uri
return cls(uri, _OPEN_MODES[mode], factory)
File "/work/imas/opt/EasyBuild/software/IMAS-Python/2.3.0-intel-2025b/lib/python3.13/site-packages/imas/backends/imas_core/db_entry_al.py", line 61, in __init__
self._setup_backend(backend, mode, factory)
File "/work/imas/opt/EasyBuild/software/IMAS-Python/2.3.0-intel-2025b/lib/python3.13/site-packages/imas/backends/imas_core/db_entry_al.py", line 120, in _setup_backend
ids_path = mdsplus_model_dir(factory)
File "/work/imas/opt/EasyBuild/software/IMAS-Python/2.3.0-intel-2025b/lib/python3.13/site-packages/imas/backends/imas_core/mdsplus_model.py", line 182, in mdsplus_model_dir
create_mdsplus_model(tmp_cache_dir_path)
File "/work/imas/opt/EasyBuild/software/IMAS-Python/2.3.0-intel-2025b/lib/python3.13/site-packages/imas/backends/imas_core/mdsplus_model.py", line 348, in create_mdsplus_model
logger.error("Error making MDSPlus model in {path}", cache_dir_path)
Message: 'Error making MDSPlus model in {path}'
Arguments: (PosixPath('/tmp/hoeneno/imas/mdsplus/3.42.2.xml-d66c8a74_83dbc8fc919444b7886f5c548036a119'),)
13:33:50 ERROR Error creating MDSPlus file @mdsplus_model.py:197
Traceback (most recent call last):
File "/home/ITER/hoeneno/GIT/IMAS-Python/../mds_test.py", line 3, in <module>
db = imas.DBEntry("imas:mdsplus?path=./testmds","w",dd_version="3.42.2")
File "/work/imas/opt/EasyBuild/software/IMAS-Python/2.3.0-intel-2025b/lib/python3.13/site-packages/imas/db_entry.py", line 192, in __init__
self._dbe_impl = cls.from_uri(self.uri, mode, self._ids_factory)
~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/work/imas/opt/EasyBuild/software/IMAS-Python/2.3.0-intel-2025b/lib/python3.13/site-packages/imas/backends/imas_core/db_entry_al.py", line 84, in from_uri
return cls(uri, _OPEN_MODES[mode], factory)
File "/work/imas/opt/EasyBuild/software/IMAS-Python/2.3.0-intel-2025b/lib/python3.13/site-packages/imas/backends/imas_core/db_entry_al.py", line 61, in __init__
self._setup_backend(backend, mode, factory)
~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^
File "/work/imas/opt/EasyBuild/software/IMAS-Python/2.3.0-intel-2025b/lib/python3.13/site-packages/imas/backends/imas_core/db_entry_al.py", line 120, in _setup_backend
ids_path = mdsplus_model_dir(factory)
File "/work/imas/opt/EasyBuild/software/IMAS-Python/2.3.0-intel-2025b/lib/python3.13/site-packages/imas/backends/imas_core/mdsplus_model.py", line 200, in mdsplus_model_dir
raise ee
File "/work/imas/opt/EasyBuild/software/IMAS-Python/2.3.0-intel-2025b/lib/python3.13/site-packages/imas/backends/imas_core/mdsplus_model.py", line 182, in mdsplus_model_dir
create_mdsplus_model(tmp_cache_dir_path)
~~~~~~~~~~~~~~~~~~~~^^^^^^^^^^^^^^^^^^^^
File "/work/imas/opt/EasyBuild/software/IMAS-Python/2.3.0-intel-2025b/lib/python3.13/site-packages/imas/backends/imas_core/mdsplus_model.py", line 349, in create_mdsplus_model
raise e
File "/work/imas/opt/EasyBuild/software/IMAS-Python/2.3.0-intel-2025b/lib/python3.13/site-packages/imas/backends/imas_core/mdsplus_model.py", line 327, in create_mdsplus_model
check_output(
~~~~~~~~~~~~^
[
^
...<14 lines>...
},
^^
)
^
File "/work/imas/opt/EasyBuild/software/Python/3.13.5-GCCcore-14.3.0/lib/python3.13/subprocess.py", line 472, in check_output
return run(*popenargs, stdout=PIPE, timeout=timeout, check=True,
~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
**kwargs).stdout
^^^^^^^^^
File "/work/imas/opt/EasyBuild/software/Python/3.13.5-GCCcore-14.3.0/lib/python3.13/subprocess.py", line 577, in run
raise CalledProcessError(retcode, process.args,
output=stdout, stderr=stderr)
subprocess.CalledProcessError: Command '['java', '-Xms1g', '-Xmx8g', '-XX:+UseG1GC', '-cp', '/work/imas/opt/EasyBuild/software/MDSplus/7.153.3-GCCcore-14.3.0/java/classes/jTraverser.jar', 'mds.jtraverser.CompileTree', 'ids']' returned non-zero exit status 1.
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